Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeastyeast

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF16P43569 YBL039C-AYBL039C-A 84 nt1.33□□□□□ -2.2
CAF16P43569 YOR314W-AYOR314W-A 111 nt1.32□□□□□ -2.2
CAF16P43569 CDC31YOR257W 486 nt1.31□□□□□ -2.2
CAF16P43569 NUP192YJL039C 5052 nt1.31□□□□□ -2.2
CAF16P43569 KAP120YPL125W 3099 nt1.31□□□□□ -2.2
CAF16P43569 CHS6YJL099W 2241 nt1.3□□□□□ -2.2
CAF16P43569 RAD9YDR217C 3930 nt1.29□□□□□ -2.2
CAF16P43569 YIL020C-AYIL020C-A 339 nt1.29□□□□□ -2.2
CAF16P43569 PRP16YKR086W 3216 nt1.29□□□□□ -2.2
CAF16P43569 tL(UAA)QtL(UAA)Q 85 nt1.28□□□□□ -2.2
CAF16P43569 YLR232WYLR232W 348 nt1.28□□□□□ -2.2
CAF16P43569 YLR399W-AYLR399W-A 105 nt1.28□□□□□ -2.2
CAF16P43569 YPR160W-AYPR160W-A 81 nt1.27□□□□□ -2.21
CAF16P43569 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
CAF16P43569 YHR131W-AYHR131W-A 246 nt1.24□□□□□ -2.21
CAF16P43569 CAT8YMR280C 4302 nt1.22□□□□□ -2.21
CAF16P43569 YOR329W-AYOR329W-A 210 nt1.22□□□□□ -2.21
CAF16P43569 tN(GUU)QtN(GUU)Q 71 nt1.21□□□□□ -2.22
CAF16P43569 BEM3YPL115C 3387 nt1.21□□□□□ -2.22
CAF16P43569 YDR544CYDR544C 429 nt1.2□□□□□ -2.22
CAF16P43569 LAA1YJL207C 6045 nt1.18□□□□□ -2.22
CAF16P43569 QCR9YGR183C 201 nt1.17□□□□□ -2.22
CAF16P43569 NST1YNL091W 3723 nt1.16□□□□□ -2.22
CAF16P43569 UBP3YER151C 2739 nt1.16□□□□□ -2.22
CAF16P43569 tM(CAU)Q2tM(CAU)Q2 78 nt1.16□□□□□ -2.22
CAF16P43569 YDL073WYDL073W 2955 nt1.15□□□□□ -2.23
CAF16P43569 YSP1YHR155W 3687 nt1.14□□□□□ -2.23
CAF16P43569 MSH3YCR092C 3057 nt1.14□□□□□ -2.23
CAF16P43569 YNL067W-BYNL067W-B 141 nt1.14□□□□□ -2.23
CAF16P43569 YGR130CYGR130C 2451 nt1.14□□□□□ -2.23
CAF16P43569 YNL284C-BYNL284C-B 5268 nt1.14□□□□□ -2.23
CAF16P43569 ANS1YHR126C 480 nt1.13□□□□□ -2.23
CAF16P43569 snR39BsnR39B 96 nt1.12□□□□□ -2.23
CAF16P43569 YCL001W-BYCL001W-B 255 nt1.12□□□□□ -2.23
CAF16P43569 COG6YNL041C 2520 nt1.12□□□□□ -2.23
CAF16P43569 OST4YDL232W 111 nt1.11□□□□□ -2.23
CAF16P43569 SCC2YDR180W 4482 nt1.09□□□□□ -2.24
CAF16P43569 RKR1YMR247C 4689 nt1.09□□□□□ -2.24
CAF16P43569 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
CAF16P43569 YDR210WYDR210W 228 nt1.05□□□□□ -2.24
CAF16P43569 YBR072C-AYBR072C-A 162 nt1.05□□□□□ -2.24
CAF16P43569 tH(GUG)E1tH(GUG)E1 72 nt1.04□□□□□ -2.24
CAF16P43569 tH(GUG)E2tH(GUG)E2 72 nt1.04□□□□□ -2.24
CAF16P43569 tH(GUG)G1tH(GUG)G1 72 nt1.04□□□□□ -2.24
CAF16P43569 tH(GUG)G2tH(GUG)G2 72 nt1.04□□□□□ -2.24
CAF16P43569 tH(GUG)HtH(GUG)H 72 nt1.04□□□□□ -2.24
CAF16P43569 tH(GUG)KtH(GUG)K 72 nt1.04□□□□□ -2.24
CAF16P43569 tH(GUG)MtH(GUG)M 72 nt1.04□□□□□ -2.24
CAF16P43569 YJL127W-AYJL127W-A 117 nt1.04□□□□□ -2.24
CAF16P43569 YCR095W-AYCR095W-A 159 nt1.03□□□□□ -2.24
CAF16P43569 SOM1YEL059C-A 225 nt1.03□□□□□ -2.24
CAF16P43569 RPM2YML091C 3609 nt1.03□□□□□ -2.25
CAF16P43569 SEC1YDR164C 2175 nt1.03□□□□□ -2.25
CAF16P43569 YPR117WYPR117W 7470 nt1.02□□□□□ -2.25
CAF16P43569 GLG1YKR058W 1851 nt1.01□□□□□ -2.25
CAF16P43569 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
CAF16P43569 tV(UAC)BtV(UAC)B 74 nt1□□□□□ -2.25
CAF16P43569 tV(UAC)DtV(UAC)D 74 nt1□□□□□ -2.25
CAF16P43569 YIL071W-AYIL071W-A 477 nt0.99□□□□□ -2.25
CAF16P43569 ULP2YIL031W 3105 nt0.99□□□□□ -2.25
CAF16P43569 BEM2YER155C 6504 nt0.98□□□□□ -2.25
CAF16P43569 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
CAF16P43569 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
CAF16P43569 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
CAF16P43569 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
CAF16P43569 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
CAF16P43569 Q0143Q0143 153 nt0.98□□□□□ -2.25
CAF16P43569 YGR146C-AYGR146C-A 162 nt0.98□□□□□ -2.25
CAF16P43569 YBR099CYBR099C 384 nt0.98□□□□□ -2.25
CAF16P43569 YLL006W-AYLL006W-A 177 nt0.97□□□□□ -2.25
CAF16P43569 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
CAF16P43569 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
CAF16P43569 IML1YJR138W 4755 nt0.97□□□□□ -2.25
CAF16P43569 NNF2YGR089W 2811 nt0.97□□□□□ -2.25
CAF16P43569 DOP1YDR141C 5097 nt0.91□□□□□ -2.26
CAF16P43569 YNL205CYNL205C 423 nt0.9□□□□□ -2.27
CAF16P43569 SIP4YJL089W 2490 nt0.9□□□□□ -2.27
CAF16P43569 YOR192C-BYOR192C-B 5313 nt0.88□□□□□ -2.27
CAF16P43569 CSE1YGL238W 2883 nt0.88□□□□□ -2.27
CAF16P43569 LTE1YAL024C 4308 nt0.88□□□□□ -2.27
CAF16P43569 PET111YMR257C 2403 nt0.87□□□□□ -2.27
CAF16P43569 snR85snR85 171 nt0.86□□□□□ -2.27
CAF16P43569 STF2YGR008C 255 nt0.85□□□□□ -2.27
CAF16P43569 BIR1YJR089W 2865 nt0.85□□□□□ -2.27
CAF16P43569 NIP1YMR309C 2439 nt0.85□□□□□ -2.27
CAF16P43569 HUG1YML058W-A 207 nt0.83□□□□□ -2.28
CAF16P43569 PMP2YEL017C-A 132 nt0.81□□□□□ -2.28
CAF16P43569 RPS26AYGL189C 360 nt0.8□□□□□ -2.28
CAF16P43569 PAU12YGR294W 363 nt0.8□□□□□ -2.28
CAF16P43569 YNL266WYNL266W 420 nt0.8□□□□□ -2.28
CAF16P43569 PAU24YBR301W 363 nt0.8□□□□□ -2.28
CAF16P43569 BUL2YML111W 2763 nt0.8□□□□□ -2.28
CAF16P43569 YDR371C-AYDR371C-A 105 nt0.78□□□□□ -2.28
CAF16P43569 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
CAF16P43569 YBR178WYBR178W 375 nt0.75□□□□□ -2.29
CAF16P43569 YNL103W-AYNL103W-A 90 nt0.72□□□□□ -2.29
CAF16P43569 SEC10YLR166C 2616 nt0.72□□□□□ -2.29
CAF16P43569 MLP1YKR095W 5628 nt0.72□□□□□ -2.29
CAF16P43569 RCO1YMR075W 2055 nt0.71□□□□□ -2.3
CAF16P43569 ORC3YLL004W 1851 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 42.9 ms