Protein–RNA interactions for Protein: P40079

LCP5, U3 small nucleolar ribonucleoprotein protein LCP5, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCP5P40079 YSP1YHR155W 3687 nt0.37□□□□□ -2.35
LCP5P40079 YGR069WYGR069W 336 nt0.37□□□□□ -2.35
LCP5P40079 MLP1YKR095W 5628 nt0.36□□□□□ -2.35
LCP5P40079 YGL052WYGL052W 306 nt0.36□□□□□ -2.35
LCP5P40079 YBL100W-BYBL100W-B 5313 nt0.36□□□□□ -2.35
LCP5P40079 BEM3YPL115C 3387 nt0.36□□□□□ -2.35
LCP5P40079 YOR008C-AYOR008C-A 225 nt0.35□□□□□ -2.35
LCP5P40079 snR74snR74 88 nt0.34□□□□□ -2.36
LCP5P40079 YDR524W-CYDR524W-C 90 nt0.34□□□□□ -2.36
LCP5P40079 YDR371C-AYDR371C-A 105 nt0.33□□□□□ -2.36
LCP5P40079 YMR172C-AYMR172C-A 384 nt0.33□□□□□ -2.36
LCP5P40079 YDR366CYDR366C 399 nt0.32□□□□□ -2.36
LCP5P40079 YER053C-AYER053C-A 114 nt0.32□□□□□ -2.36
LCP5P40079 RPS26AYGL189C 360 nt0.32□□□□□ -2.36
LCP5P40079 ABF2YMR072W 552 nt0.32□□□□□ -2.36
LCP5P40079 ORC3YLL004W 1851 nt0.32□□□□□ -2.36
LCP5P40079 YHR131W-AYHR131W-A 246 nt0.31□□□□□ -2.36
LCP5P40079 COX12YLR038C 252 nt0.31□□□□□ -2.36
LCP5P40079 SNU13YEL026W 381 nt0.3□□□□□ -2.36
LCP5P40079 YKL145W-AYKL145W-A 93 nt0.3□□□□□ -2.36
LCP5P40079 YLL006W-AYLL006W-A 177 nt0.3□□□□□ -2.36
LCP5P40079 YLR041WYLR041W 321 nt0.3□□□□□ -2.36
LCP5P40079 YNL277W-AYNL277W-A 189 nt0.29□□□□□ -2.36
LCP5P40079 BIR1YJR089W 2865 nt0.28□□□□□ -2.36
LCP5P40079 YCR038W-AYCR038W-A 126 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)BtF(GAA)B 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)FtF(GAA)F 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)GtF(GAA)G 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)H1tF(GAA)H1 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)H2tF(GAA)H2 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)MtF(GAA)M 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)P1tF(GAA)P1 73 nt0.28□□□□□ -2.36
LCP5P40079 tF(GAA)P2tF(GAA)P2 73 nt0.28□□□□□ -2.36
LCP5P40079 YNL146WYNL146W 303 nt0.28□□□□□ -2.36
LCP5P40079 NIP1YMR309C 2439 nt0.26□□□□□ -2.37
LCP5P40079 AI1Q0050 2505 nt0.26□□□□□ -2.37
LCP5P40079 TRS65YGR166W 1683 nt0.26□□□□□ -2.37
LCP5P40079 UTP8YGR128C 2142 nt0.25□□□□□ -2.37
LCP5P40079 YNL054W-BYNL054W-B 5250 nt0.25□□□□□ -2.37
LCP5P40079 YIL002W-AYIL002W-A 210 nt0.23□□□□□ -2.37
LCP5P40079 YPR010C-AYPR010C-A 219 nt0.23□□□□□ -2.37
LCP5P40079 snR65snR65 100 nt0.21□□□□□ -2.38
LCP5P40079 YBR072C-AYBR072C-A 162 nt0.21□□□□□ -2.38
LCP5P40079 YIR030W-AYIR030W-A 384 nt0.2□□□□□ -2.38
LCP5P40079 RCO1YMR075W 2055 nt0.2□□□□□ -2.38
LCP5P40079 IQG1YPL242C 4488 nt0.19□□□□□ -2.38
LCP5P40079 YLR232WYLR232W 348 nt0.19□□□□□ -2.38
LCP5P40079 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
LCP5P40079 YKU70YMR284W 1809 nt0.18□□□□□ -2.38
LCP5P40079 YBR182C-AYBR182C-A 195 nt0.18□□□□□ -2.38
LCP5P40079 MLP2YIL149C 5040 nt0.17□□□□□ -2.38
LCP5P40079 YOR186C-AYOR186C-A 210 nt0.17□□□□□ -2.38
LCP5P40079 snR55snR55 98 nt0.16□□□□□ -2.38
LCP5P40079 APQ12YIL040W 417 nt0.16□□□□□ -2.38
LCP5P40079 ESP1YGR098C 4893 nt0.16□□□□□ -2.38
LCP5P40079 BUL2YML111W 2763 nt0.15□□□□□ -2.39
LCP5P40079 CSE1YGL238W 2883 nt0.14□□□□□ -2.39
LCP5P40079 tF(GAA)QtF(GAA)Q 75 nt0.14□□□□□ -2.39
LCP5P40079 YEL073CYEL073C 324 nt0.14□□□□□ -2.39
LCP5P40079 YOL014WYOL014W 375 nt0.14□□□□□ -2.39
LCP5P40079 snR49snR49 165 nt0.14□□□□□ -2.39
LCP5P40079 YMR158W-BYMR158W-B 321 nt0.13□□□□□ -2.39
LCP5P40079 TAH1YCR060W 336 nt0.12□□□□□ -2.39
LCP5P40079 YDR544CYDR544C 429 nt0.12□□□□□ -2.39
LCP5P40079 QCR9YGR183C 201 nt0.12□□□□□ -2.39
LCP5P40079 YGL041CYGL041C 204 nt0.11□□□□□ -2.39
LCP5P40079 YML099W-AYML099W-A 330 nt0.11□□□□□ -2.39
LCP5P40079 SDH6YDR379C-A 240 nt0.1□□□□□ -2.39
LCP5P40079 GLG1YKR058W 1851 nt0.1□□□□□ -2.39
LCP5P40079 YPL152W-AYPL152W-A 99 nt0.09□□□□□ -2.4
LCP5P40079 YOL155W-AYOL155W-A 135 nt0.08□□□□□ -2.4
LCP5P40079 YBR131C-AYBR131C-A 90 nt0.08□□□□□ -2.4
LCP5P40079 YER181CYER181C 324 nt0.07□□□□□ -2.4
LCP5P40079 YOR231C-AYOR231C-A 201 nt0.05□□□□□ -2.4
LCP5P40079 PRP39YML046W 1890 nt0.03□□□□□ -2.41
LCP5P40079 Q0142Q0142 177 nt0.02□□□□□ -2.41
LCP5P40079 YBL039C-AYBL039C-A 84 nt0.02□□□□□ -2.41
LCP5P40079 THO2YNL139C 4794 nt0.02□□□□□ -2.41
LCP5P40079 COG6YNL041C 2520 nt0.01□□□□□ -2.41
LCP5P40079 YEL014CYEL014C 306 nt-0.01□□□□□ -2.41
LCP5P40079 YGL188C-AYGL188C-A 141 nt-0.01□□□□□ -2.41
LCP5P40079 YBR099CYBR099C 384 nt-0.01□□□□□ -2.41
LCP5P40079 YER078W-AYER078W-A 165 nt-0.03□□□□□ -2.41
LCP5P40079 YGL182CYGL182C 324 nt-0.03□□□□□ -2.41
LCP5P40079 YJL182CYJL182C 318 nt-0.04□□□□□ -2.42
LCP5P40079 SOV1YMR066W 2697 nt-0.05□□□□□ -2.42
LCP5P40079 snR128snR128 126 nt-0.06□□□□□ -2.42
LCP5P40079 EST1YLR233C 2100 nt-0.07□□□□□ -2.42
LCP5P40079 YOR302WYOR302W 78 nt-0.07□□□□□ -2.42
LCP5P40079 YOR314W-AYOR314W-A 111 nt-0.07□□□□□ -2.42
LCP5P40079 YNL097C-BYNL097C-B 123 nt-0.12□□□□□ -2.43
LCP5P40079 YOR381W-AYOR381W-A 168 nt-0.12□□□□□ -2.43
LCP5P40079 snR45snR45 172 nt-0.12□□□□□ -2.43
LCP5P40079 snR80snR80 171 nt-0.15□□□□□ -2.43
LCP5P40079 YDR210WYDR210W 228 nt-0.15□□□□□ -2.43
LCP5P40079 snR8snR8 190 nt-0.16□□□□□ -2.44
LCP5P40079 tM(CAU)Q2tM(CAU)Q2 78 nt-0.17□□□□□ -2.44
LCP5P40079 YOR170WYOR170W 306 nt-0.2□□□□□ -2.44
LCP5P40079 snR52snR52 92 nt-0.21□□□□□ -2.44
LCP5P40079 YGR164WYGR164W 336 nt-0.26□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 87.9 ms