Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 KRE33YNL132W 3171 nt2.88□□□□□ -1.95
YCK3P39962 RPN1YHR027C 2982 nt2.87□□□□□ -1.95
YCK3P39962 STT4YLR305C 5703 nt2.86□□□□□ -1.95
YCK3P39962 GCN1YGL195W 8019 nt2.85□□□□□ -1.95
YCK3P39962 CDC25YLR310C 4770 nt2.85□□□□□ -1.95
YCK3P39962 YEL025CYEL025C 3567 nt2.85□□□□□ -1.95
YCK3P39962 YGL063C-AYGL063C-A 150 nt2.84□□□□□ -1.95
YCK3P39962 CHC1YGL206C 4962 nt2.83□□□□□ -1.96
YCK3P39962 TUS1YLR425W 3924 nt2.83□□□□□ -1.96
YCK3P39962 snR58snR58 96 nt2.81□□□□□ -1.96
YCK3P39962 YMR122W-AYMR122W-A 255 nt2.81□□□□□ -1.96
YCK3P39962 YNL284C-BYNL284C-B 5268 nt2.81□□□□□ -1.96
YCK3P39962 TOR1YJR066W 7413 nt2.8□□□□□ -1.96
YCK3P39962 TRM732YMR259C 4263 nt2.77□□□□□ -1.97
YCK3P39962 tK(UUU)DtK(UUU)D 73 nt2.76□□□□□ -1.97
YCK3P39962 tK(UUU)G1tK(UUU)G1 73 nt2.76□□□□□ -1.97
YCK3P39962 tK(UUU)G2tK(UUU)G2 73 nt2.76□□□□□ -1.97
YCK3P39962 tK(UUU)KtK(UUU)K 73 nt2.76□□□□□ -1.97
YCK3P39962 tK(UUU)LtK(UUU)L 73 nt2.76□□□□□ -1.97
YCK3P39962 tK(UUU)OtK(UUU)O 73 nt2.76□□□□□ -1.97
YCK3P39962 tK(UUU)PtK(UUU)P 73 nt2.76□□□□□ -1.97
YCK3P39962 YLR422WYLR422W 5799 nt2.75□□□□□ -1.97
YCK3P39962 SLH1YGR271W 5904 nt2.74□□□□□ -1.97
YCK3P39962 SGS1YMR190C 4344 nt2.74□□□□□ -1.97
YCK3P39962 NEO1YIL048W 3456 nt2.73□□□□□ -1.97
YCK3P39962 RIF1YBR275C 5751 nt2.73□□□□□ -1.97
YCK3P39962 SNQ2YDR011W 4506 nt2.73□□□□□ -1.97
YCK3P39962 CLU1YMR012W 3834 nt2.7□□□□□ -1.98
YCK3P39962 YSP2YDR326C 4317 nt2.7□□□□□ -1.98
YCK3P39962 SEC31YDL195W 3822 nt2.7□□□□□ -1.98
YCK3P39962 HIR3YJR140C 4947 nt2.69□□□□□ -1.98
YCK3P39962 SPO14YKR031C 5052 nt2.68□□□□□ -1.98
YCK3P39962 SIN3YOL004W 4611 nt2.67□□□□□ -1.98
YCK3P39962 SMC4YLR086W 4257 nt2.66□□□□□ -1.98
YCK3P39962 tF(GAA)DtF(GAA)D 73 nt2.66□□□□□ -1.98
YCK3P39962 tF(GAA)NtF(GAA)N 73 nt2.66□□□□□ -1.98
YCK3P39962 RAV1YJR033C 4074 nt2.66□□□□□ -1.98
YCK3P39962 SPP41YDR464W 4308 nt2.65□□□□□ -1.98
YCK3P39962 SSK2YNR031C 4740 nt2.65□□□□□ -1.99
YCK3P39962 tC(GCA)BtC(GCA)B 72 nt2.64□□□□□ -1.99
YCK3P39962 tC(GCA)GtC(GCA)G 72 nt2.64□□□□□ -1.99
YCK3P39962 tC(GCA)P1tC(GCA)P1 72 nt2.64□□□□□ -1.99
YCK3P39962 tC(GCA)P2tC(GCA)P2 72 nt2.64□□□□□ -1.99
YCK3P39962 RPA190YOR341W 4995 nt2.63□□□□□ -1.99
YCK3P39962 NUP192YJL039C 5052 nt2.63□□□□□ -1.99
YCK3P39962 UBR1YGR184C 5853 nt2.62□□□□□ -1.99
YCK3P39962 REV3YPL167C 4515 nt2.61□□□□□ -1.99
YCK3P39962 SAP1YER047C 2694 nt2.61□□□□□ -1.99
YCK3P39962 DYN1YKR054C 12279 nt2.6□□□□□ -1.99
YCK3P39962 KAP122YGL016W 3246 nt2.59□□□□□ -1.99
YCK3P39962 tQ(UUG)BtQ(UUG)B 72 nt2.59□□□□□ -1.99
YCK3P39962 VAM6YDL077C 3150 nt2.59□□□□□ -2
YCK3P39962 PSD2YGR170W 3417 nt2.58□□□□□ -2
YCK3P39962 TOP2YNL088W 4287 nt2.58□□□□□ -2
YCK3P39962 RGC1YPR115W 3252 nt2.57□□□□□ -2
YCK3P39962 YIL082W-AYIL082W-A 4497 nt2.57□□□□□ -2
YCK3P39962 TAO3YIL129C 7131 nt2.57□□□□□ -2
YCK3P39962 YKL145W-AYKL145W-A 93 nt2.56□□□□□ -2
YCK3P39962 MOT1YPL082C 5604 nt2.56□□□□□ -2
YCK3P39962 FLO1YAR050W 4614 nt2.54□□□□□ -2
YCK3P39962 SEC7YDR170C 6030 nt2.53□□□□□ -2
YCK3P39962 PRP8YHR165C 7242 nt2.52□□□□□ -2.01
YCK3P39962 MYO4YAL029C 4416 nt2.51□□□□□ -2.01
YCK3P39962 TOM1YDR457W 9807 nt2.5□□□□□ -2.01
YCK3P39962 MSB2YGR014W 3921 nt2.5□□□□□ -2.01
YCK3P39962 YNL054W-BYNL054W-B 5250 nt2.5□□□□□ -2.01
YCK3P39962 PDR11YIL013C 4236 nt2.48□□□□□ -2.01
YCK3P39962 MON2YNL297C 4911 nt2.46□□□□□ -2.02
YCK3P39962 ECM29YHL030W 5607 nt2.45□□□□□ -2.02
YCK3P39962 BPH1YCR032W 6504 nt2.44□□□□□ -2.02
YCK3P39962 YCS4YLR272C 3531 nt2.42□□□□□ -2.02
YCK3P39962 YDR098C-BYDR098C-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YDR210C-DYDR210C-D 5268 nt2.42□□□□□ -2.02
YCK3P39962 YDR316W-BYDR316W-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YDR365W-BYDR365W-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YER138CYER138C 5268 nt2.42□□□□□ -2.02
YCK3P39962 YER160CYER160C 5268 nt2.42□□□□□ -2.02
YCK3P39962 YGR038C-BYGR038C-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YGR161C-DYGR161C-D 5268 nt2.42□□□□□ -2.02
YCK3P39962 YJR027WYJR027W 5268 nt2.42□□□□□ -2.02
YCK3P39962 YLR157C-BYLR157C-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YML039WYML039W 5268 nt2.42□□□□□ -2.02
YCK3P39962 YML045WYML045W 5268 nt2.42□□□□□ -2.02
YCK3P39962 YMR050CYMR050C 5268 nt2.42□□□□□ -2.02
YCK3P39962 YOL103W-BYOL103W-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YBR012W-BYBR012W-B 5271 nt2.42□□□□□ -2.02
YCK3P39962 YOR142W-BYOR142W-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YPL257W-BYPL257W-B 5268 nt2.42□□□□□ -2.02
YCK3P39962 YPR158W-BYPR158W-B 5271 nt2.42□□□□□ -2.02
YCK3P39962 TOR2YKL203C 7425 nt2.42□□□□□ -2.02
YCK3P39962 BNR1YIL159W 4128 nt2.41□□□□□ -2.02
YCK3P39962 YHR086W-AYHR086W-A 162 nt2.4□□□□□ -2.03
YCK3P39962 CFT1YDR301W 4074 nt2.38□□□□□ -2.03
YCK3P39962 BNI1YNL271C 5862 nt2.36□□□□□ -2.03
YCK3P39962 FKS3YMR306W 5358 nt2.36□□□□□ -2.03
YCK3P39962 YBL005W-BYBL005W-B 5268 nt2.36□□□□□ -2.03
YCK3P39962 YOR093CYOR093C 4947 nt2.36□□□□□ -2.03
YCK3P39962 FLO11YIR019C 4104 nt2.34□□□□□ -2.03
YCK3P39962 SPT7YBR081C 3999 nt2.34□□□□□ -2.04
YCK3P39962 SWI4YER111C 3282 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 45.3 ms