Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 HUG1YML058W-A 207 nt1.14□□□□□ -2.23
LNP1P38878 snR48snR48 113 nt1.14□□□□□ -2.23
LNP1P38878 STF2YGR008C 255 nt1.13□□□□□ -2.23
LNP1P38878 YBL039C-AYBL039C-A 84 nt1.13□□□□□ -2.23
LNP1P38878 YPR160W-AYPR160W-A 81 nt1.13□□□□□ -2.23
LNP1P38878 YNL284C-BYNL284C-B 5268 nt1.13□□□□□ -2.23
LNP1P38878 FYV10YIL097W 1551 nt1.13□□□□□ -2.23
LNP1P38878 YGL182CYGL182C 324 nt1.12□□□□□ -2.23
LNP1P38878 tH(GUG)E1tH(GUG)E1 72 nt1.1□□□□□ -2.23
LNP1P38878 tH(GUG)E2tH(GUG)E2 72 nt1.1□□□□□ -2.23
LNP1P38878 tH(GUG)G1tH(GUG)G1 72 nt1.1□□□□□ -2.23
LNP1P38878 tH(GUG)G2tH(GUG)G2 72 nt1.1□□□□□ -2.23
LNP1P38878 tH(GUG)HtH(GUG)H 72 nt1.1□□□□□ -2.23
LNP1P38878 tH(GUG)KtH(GUG)K 72 nt1.1□□□□□ -2.23
LNP1P38878 tH(GUG)MtH(GUG)M 72 nt1.1□□□□□ -2.23
LNP1P38878 YLR399W-AYLR399W-A 105 nt1.1□□□□□ -2.23
LNP1P38878 YOR170WYOR170W 306 nt1.1□□□□□ -2.23
LNP1P38878 IML1YJR138W 4755 nt1.09□□□□□ -2.24
LNP1P38878 YPL060C-AYPL060C-A 3315 nt1.09□□□□□ -2.24
LNP1P38878 CHS6YJL099W 2241 nt1.08□□□□□ -2.24
LNP1P38878 TAH1YCR060W 336 nt1.07□□□□□ -2.24
LNP1P38878 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
LNP1P38878 ATP8Q0080 147 nt1.06□□□□□ -2.24
LNP1P38878 Q0092Q0092 141 nt1.06□□□□□ -2.24
LNP1P38878 tN(GUU)QtN(GUU)Q 71 nt1.06□□□□□ -2.24
LNP1P38878 YOR102WYOR102W 351 nt1.06□□□□□ -2.24
LNP1P38878 YSP1YHR155W 3687 nt1.05□□□□□ -2.24
LNP1P38878 tL(UAA)QtL(UAA)Q 85 nt1.05□□□□□ -2.24
LNP1P38878 YHR131W-AYHR131W-A 246 nt1.05□□□□□ -2.24
LNP1P38878 UTP8YGR128C 2142 nt1.04□□□□□ -2.24
LNP1P38878 SCC2YDR180W 4482 nt1.04□□□□□ -2.24
LNP1P38878 SNU13YEL026W 381 nt1.04□□□□□ -2.24
LNP1P38878 YPR117WYPR117W 7470 nt1.03□□□□□ -2.24
LNP1P38878 YGR164WYGR164W 336 nt1.03□□□□□ -2.24
LNP1P38878 SDH6YDR379C-A 240 nt1.02□□□□□ -2.25
LNP1P38878 SPT7YBR081C 3999 nt1.02□□□□□ -2.25
LNP1P38878 YHL015W-AYHL015W-A 84 nt1.01□□□□□ -2.25
LNP1P38878 tV(UAC)BtV(UAC)B 74 nt1.01□□□□□ -2.25
LNP1P38878 tV(UAC)DtV(UAC)D 74 nt1.01□□□□□ -2.25
LNP1P38878 YLR232WYLR232W 348 nt1.01□□□□□ -2.25
LNP1P38878 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
LNP1P38878 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
LNP1P38878 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
LNP1P38878 OST4YDL232W 111 nt0.99□□□□□ -2.25
LNP1P38878 YNL170WYNL170W 396 nt0.99□□□□□ -2.25
LNP1P38878 RKR1YMR247C 4689 nt0.99□□□□□ -2.25
LNP1P38878 YOR314W-AYOR314W-A 111 nt0.98□□□□□ -2.25
LNP1P38878 COG6YNL041C 2520 nt0.97□□□□□ -2.25
LNP1P38878 SIP4YJL089W 2490 nt0.97□□□□□ -2.25
LNP1P38878 BEM2YER155C 6504 nt0.96□□□□□ -2.26
LNP1P38878 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
LNP1P38878 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
LNP1P38878 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
LNP1P38878 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
LNP1P38878 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
LNP1P38878 YOR329W-AYOR329W-A 210 nt0.95□□□□□ -2.26
LNP1P38878 snR39BsnR39B 96 nt0.95□□□□□ -2.26
LNP1P38878 BEM3YPL115C 3387 nt0.93□□□□□ -2.26
LNP1P38878 BUD3YCL014W 4911 nt0.92□□□□□ -2.26
LNP1P38878 SEC1YDR164C 2175 nt0.92□□□□□ -2.26
LNP1P38878 BUL2YML111W 2763 nt0.91□□□□□ -2.26
LNP1P38878 ULP2YIL031W 3105 nt0.91□□□□□ -2.26
LNP1P38878 YDR544CYDR544C 429 nt0.9□□□□□ -2.27
LNP1P38878 UBP3YER151C 2739 nt0.88□□□□□ -2.27
LNP1P38878 YDR210WYDR210W 228 nt0.87□□□□□ -2.27
LNP1P38878 QCR9YGR183C 201 nt0.87□□□□□ -2.27
LNP1P38878 YJL127W-AYJL127W-A 117 nt0.84□□□□□ -2.27
LNP1P38878 YNL067W-BYNL067W-B 141 nt0.84□□□□□ -2.27
LNP1P38878 LTE1YAL024C 4308 nt0.83□□□□□ -2.28
LNP1P38878 GLG1YKR058W 1851 nt0.82□□□□□ -2.28
LNP1P38878 YBR072C-AYBR072C-A 162 nt0.82□□□□□ -2.28
LNP1P38878 tM(CAU)Q2tM(CAU)Q2 78 nt0.81□□□□□ -2.28
LNP1P38878 YIL071W-AYIL071W-A 477 nt0.81□□□□□ -2.28
LNP1P38878 NNF2YGR089W 2811 nt0.8□□□□□ -2.28
LNP1P38878 PAU12YGR294W 363 nt0.8□□□□□ -2.28
LNP1P38878 PAU24YBR301W 363 nt0.8□□□□□ -2.28
LNP1P38878 YCL001W-BYCL001W-B 255 nt0.8□□□□□ -2.28
LNP1P38878 YGR146C-AYGR146C-A 162 nt0.79□□□□□ -2.28
LNP1P38878 NIP1YMR309C 2439 nt0.78□□□□□ -2.28
LNP1P38878 YLL006W-AYLL006W-A 177 nt0.77□□□□□ -2.29
LNP1P38878 YCR095W-AYCR095W-A 159 nt0.76□□□□□ -2.29
LNP1P38878 IQG1YPL242C 4488 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)BtF(GAA)B 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)FtF(GAA)F 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)GtF(GAA)G 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)H1tF(GAA)H1 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)H2tF(GAA)H2 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)MtF(GAA)M 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)P1tF(GAA)P1 73 nt0.75□□□□□ -2.29
LNP1P38878 tF(GAA)P2tF(GAA)P2 73 nt0.75□□□□□ -2.29
LNP1P38878 YOR192C-BYOR192C-B 5313 nt0.75□□□□□ -2.29
LNP1P38878 YIL142C-AYIL142C-A 333 nt0.74□□□□□ -2.29
LNP1P38878 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
LNP1P38878 RPS26AYGL189C 360 nt0.73□□□□□ -2.29
LNP1P38878 YDR371C-AYDR371C-A 105 nt0.7□□□□□ -2.3
LNP1P38878 SOM1YEL059C-A 225 nt0.7□□□□□ -2.3
LNP1P38878 BIR1YJR089W 2865 nt0.68□□□□□ -2.3
LNP1P38878 PET111YMR257C 2403 nt0.68□□□□□ -2.3
LNP1P38878 YNL205CYNL205C 423 nt0.67□□□□□ -2.3
LNP1P38878 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms