Protein–RNA interactions for Protein: P17255

VMA1, V-type proton ATPase catalytic subunit A, yeastyeast

Known RBP Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA1P17255 HIR3YJR140C 4947 nt2.71□□□□□ -1.98
VMA1P17255 UTP21YLR409C 2820 nt2.69□□□□□ -1.98
VMA1P17255 EST1YLR233C 2100 nt2.69□□□□□ -1.98
VMA1P17255 SGS1YMR190C 4344 nt2.68□□□□□ -1.98
VMA1P17255 RAD50YNL250W 3939 nt2.67□□□□□ -1.98
VMA1P17255 SLH1YGR271W 5904 nt2.67□□□□□ -1.98
VMA1P17255 YPR160W-AYPR160W-A 81 nt2.67□□□□□ -1.98
VMA1P17255 GIP3YPL137C 3831 nt2.66□□□□□ -1.98
VMA1P17255 SCD5YOR329C 2619 nt2.65□□□□□ -1.99
VMA1P17255 PDR11YIL013C 4236 nt2.64□□□□□ -1.99
VMA1P17255 PSD2YGR170W 3417 nt2.64□□□□□ -1.99
VMA1P17255 KIP1YBL063W 3336 nt2.64□□□□□ -1.99
VMA1P17255 PKH3YDR466W 2697 nt2.64□□□□□ -1.99
VMA1P17255 snR69snR69 101 nt2.63□□□□□ -1.99
VMA1P17255 YOR055WYOR055W 435 nt2.63□□□□□ -1.99
VMA1P17255 PET111YMR257C 2403 nt2.63□□□□□ -1.99
VMA1P17255 EMC5YIL027C 426 nt2.61□□□□□ -1.99
VMA1P17255 RDS3YPR094W 324 nt2.6□□□□□ -1.99
VMA1P17255 MSH6YDR097C 3729 nt2.58□□□□□ -2
VMA1P17255 HSL1YKL101W 4557 nt2.58□□□□□ -2
VMA1P17255 MSB1YOR188W 3414 nt2.58□□□□□ -2
VMA1P17255 YLR422WYLR422W 5799 nt2.57□□□□□ -2
VMA1P17255 PRP16YKR086W 3216 nt2.57□□□□□ -2
VMA1P17255 SXM1YDR395W 2835 nt2.57□□□□□ -2
VMA1P17255 RAV1YJR033C 4074 nt2.57□□□□□ -2
VMA1P17255 NUP170YBL079W 4509 nt2.56□□□□□ -2
VMA1P17255 ULP2YIL031W 3105 nt2.56□□□□□ -2
VMA1P17255 KOG1YHR186C 4674 nt2.56□□□□□ -2
VMA1P17255 BNR1YIL159W 4128 nt2.55□□□□□ -2
VMA1P17255 STH1YIL126W 4080 nt2.54□□□□□ -2
VMA1P17255 TFC3YAL001C 3483 nt2.54□□□□□ -2
VMA1P17255 VPS13YLL040C 9435 nt2.54□□□□□ -2
VMA1P17255 CSE1YGL238W 2883 nt2.52□□□□□ -2.01
VMA1P17255 snR14snR14 160 nt2.52□□□□□ -2.01
VMA1P17255 SEC8YPR055W 3198 nt2.52□□□□□ -2.01
VMA1P17255 STO1YMR125W 2586 nt2.52□□□□□ -2.01
VMA1P17255 YSP1YHR155W 3687 nt2.51□□□□□ -2.01
VMA1P17255 NST1YNL091W 3723 nt2.49□□□□□ -2.01
VMA1P17255 CDC25YLR310C 4770 nt2.49□□□□□ -2.01
VMA1P17255 GEA2YEL022W 4380 nt2.48□□□□□ -2.01
VMA1P17255 tN(GUU)QtN(GUU)Q 71 nt2.47□□□□□ -2.01
VMA1P17255 KAP122YGL016W 3246 nt2.46□□□□□ -2.02
VMA1P17255 EST2YLR318W 2655 nt2.46□□□□□ -2.02
VMA1P17255 SEC31YDL195W 3822 nt2.46□□□□□ -2.02
VMA1P17255 YCS4YLR272C 3531 nt2.45□□□□□ -2.02
VMA1P17255 UTP22YGR090W 3714 nt2.45□□□□□ -2.02
VMA1P17255 HER1YOR227W 3741 nt2.44□□□□□ -2.02
VMA1P17255 SEC16YPL085W 6588 nt2.44□□□□□ -2.02
VMA1P17255 YLR399W-AYLR399W-A 105 nt2.43□□□□□ -2.02
VMA1P17255 SMC4YLR086W 4257 nt2.43□□□□□ -2.02
VMA1P17255 HUG1YML058W-A 207 nt2.42□□□□□ -2.02
VMA1P17255 DNF1YER166W 4716 nt2.42□□□□□ -2.02
VMA1P17255 SPF1YEL031W 3648 nt2.41□□□□□ -2.02
VMA1P17255 IRC20YLR247C 4671 nt2.41□□□□□ -2.02
VMA1P17255 SEC3YER008C 4011 nt2.39□□□□□ -2.03
VMA1P17255 YPL060C-AYPL060C-A 3315 nt2.39□□□□□ -2.03
VMA1P17255 CSF1YLR087C 8877 nt2.39□□□□□ -2.03
VMA1P17255 YHR180W-AYHR180W-A 183 nt2.39□□□□□ -2.03
VMA1P17255 YJL077W-AYJL077W-A 87 nt2.39□□□□□ -2.03
VMA1P17255 APL3YBL037W 3078 nt2.39□□□□□ -2.03
VMA1P17255 IRA2YOL081W 9240 nt2.38□□□□□ -2.03
VMA1P17255 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
VMA1P17255 MYO4YAL029C 4416 nt2.37□□□□□ -2.03
VMA1P17255 ATG9YDL149W 2994 nt2.37□□□□□ -2.03
VMA1P17255 CAT8YMR280C 4302 nt2.36□□□□□ -2.03
VMA1P17255 UBR2YLR024C 5619 nt2.36□□□□□ -2.03
VMA1P17255 YLR419WYLR419W 4308 nt2.35□□□□□ -2.03
VMA1P17255 MSN5YDR335W 3675 nt2.35□□□□□ -2.03
VMA1P17255 TRA1YHR099W 11235 nt2.35□□□□□ -2.03
VMA1P17255 MSH3YCR092C 3057 nt2.34□□□□□ -2.03
VMA1P17255 REV3YPL167C 4515 nt2.34□□□□□ -2.03
VMA1P17255 PAU12YGR294W 363 nt2.34□□□□□ -2.03
VMA1P17255 SIP4YJL089W 2490 nt2.33□□□□□ -2.04
VMA1P17255 UBP2YOR124C 3819 nt2.33□□□□□ -2.04
VMA1P17255 BNI1YNL271C 5862 nt2.32□□□□□ -2.04
VMA1P17255 TOR2YKL203C 7425 nt2.32□□□□□ -2.04
VMA1P17255 SKI3YPR189W 4299 nt2.31□□□□□ -2.04
VMA1P17255 KCS1YDR017C 3153 nt2.31□□□□□ -2.04
VMA1P17255 YOR376W-AYOR376W-A 156 nt2.3□□□□□ -2.04
VMA1P17255 BUL2YML111W 2763 nt2.3□□□□□ -2.04
VMA1P17255 tQ(UUG)QtQ(UUG)Q 76 nt2.28□□□□□ -2.04
VMA1P17255 BPH1YCR032W 6504 nt2.26□□□□□ -2.05
VMA1P17255 TMA7YLR262C-A 195 nt2.26□□□□□ -2.05
VMA1P17255 FYV8YGR196C 2454 nt2.25□□□□□ -2.05
VMA1P17255 SWI4YER111C 3282 nt2.21□□□□□ -2.06
VMA1P17255 DGR1YNL130C-A 147 nt2.2□□□□□ -2.06
VMA1P17255 NUP145YGL092W 3954 nt2.19□□□□□ -2.06
VMA1P17255 YDL114W-AYDL114W-A 114 nt2.17□□□□□ -2.06
VMA1P17255 FKS1YLR342W 5631 nt2.16□□□□□ -2.06
VMA1P17255 YER090C-AYER090C-A 90 nt2.15□□□□□ -2.07
VMA1P17255 YLL006W-AYLL006W-A 177 nt2.15□□□□□ -2.07
VMA1P17255 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
VMA1P17255 FAB1YFR019W 6837 nt2.14□□□□□ -2.07
VMA1P17255 USO1YDL058W 5373 nt2.09□□□□□ -2.07
VMA1P17255 SPP41YDR464W 4308 nt2.09□□□□□ -2.08
VMA1P17255 snR40snR40 97 nt2.06□□□□□ -2.08
VMA1P17255 PEP1YBL017C 4740 nt2.06□□□□□ -2.08
VMA1P17255 tV(UAC)QtV(UAC)Q 76 nt2.04□□□□□ -2.08
VMA1P17255 CLU1YMR012W 3834 nt2.03□□□□□ -2.08
VMA1P17255 MON2YNL297C 4911 nt2.02□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms