Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ctla4P09793 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ctla4P09793 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.06■□□□□ 0.16
Ctla4P09793 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.06■□□□□ 0.16
Ctla4P09793 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.06■□□□□ 0.16
Ctla4P09793 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctla4P09793 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctla4P09793 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctla4P09793 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.06■□□□□ 0.16
Ctla4P09793 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ctla4P09793 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ctla4P09793 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
Ctla4P09793 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.05■□□□□ 0.16
Ctla4P09793 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.05■□□□□ 0.16
Ctla4P09793 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ctla4P09793 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ctla4P09793 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Gm7638-201ENSMUST00000121348 967 ntBASIC16.05■□□□□ 0.16
Ctla4P09793 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ctla4P09793 Gm27463-201ENSMUST00000183569 57 ntBASIC16.05■□□□□ 0.16
Ctla4P09793 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.05■□□□□ 0.16
Ctla4P09793 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctla4P09793 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.04■□□□□ 0.16
Ctla4P09793 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ctla4P09793 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ctla4P09793 Gm9987-201ENSMUST00000069768 567 ntBASIC16.04■□□□□ 0.16
Ctla4P09793 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctla4P09793 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.04■□□□□ 0.16
Ctla4P09793 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.03■□□□□ 0.16
Ctla4P09793 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ctla4P09793 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.03■□□□□ 0.16
Ctla4P09793 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Gm7889-201ENSMUST00000185591 958 ntBASIC16.03■□□□□ 0.16
Ctla4P09793 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.03■□□□□ 0.16
Ctla4P09793 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctla4P09793 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.03■□□□□ 0.16
Ctla4P09793 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctla4P09793 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ctla4P09793 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctla4P09793 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.02■□□□□ 0.16
Ctla4P09793 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctla4P09793 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.02■□□□□ 0.16
Ctla4P09793 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.02■□□□□ 0.16
Ctla4P09793 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctla4P09793 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Ctla4P09793 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ctla4P09793 Gm6433-201ENSMUST00000118634 875 ntBASIC16.02■□□□□ 0.16
Ctla4P09793 Gm13836-201ENSMUST00000121159 501 ntBASIC16.02■□□□□ 0.16
Ctla4P09793 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctla4P09793 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Ctla4P09793 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.02■□□□□ 0.16
Ctla4P09793 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Ctla4P09793 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.02■□□□□ 0.16
Ctla4P09793 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctla4P09793 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ctla4P09793 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.02■□□□□ 0.15
Ctla4P09793 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctla4P09793 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctla4P09793 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctla4P09793 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctla4P09793 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctla4P09793 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctla4P09793 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctla4P09793 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctla4P09793 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctla4P09793 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms