Protein–RNA interactions for Protein: P09547

SWI1, SWI/SNF chromatin-remodeling complex subunit SWI1, yeastyeast

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI1P09547 YHR131W-AYHR131W-A 246 nt0.07□□□□□ -2.4
SWI1P09547 YLL006W-AYLL006W-A 177 nt0.07□□□□□ -2.4
SWI1P09547 COX12YLR038C 252 nt0.06□□□□□ -2.4
SWI1P09547 HTL1YCR020W-B 237 nt0.05□□□□□ -2.4
SWI1P09547 YFL063WYFL063W 456 nt0.05□□□□□ -2.4
SWI1P09547 YJL197C-AYJL197C-A 282 nt0.05□□□□□ -2.4
SWI1P09547 YLR041WYLR041W 321 nt0.05□□□□□ -2.4
SWI1P09547 VAR1Q0140 1197 nt0.04□□□□□ -2.4
SWI1P09547 YPR016W-AYPR016W-A 261 nt0.04□□□□□ -2.4
SWI1P09547 YOR161W-AYOR161W-A 81 nt0.03□□□□□ -2.4
SWI1P09547 snR60snR60 104 nt0.02□□□□□ -2.41
SWI1P09547 YDR366CYDR366C 399 nt0.02□□□□□ -2.41
SWI1P09547 YKU70YMR284W 1809 nt0.01□□□□□ -2.41
SWI1P09547 SNU13YEL026W 381 nt0□□□□□ -2.41
SWI1P09547 YIL032CYIL032C 357 nt0□□□□□ -2.41
SWI1P09547 CSE1YGL238W 2883 nt-0□□□□□ -2.41
SWI1P09547 YLL019W-AYLL019W-A 93 nt-0.01□□□□□ -2.41
SWI1P09547 YDR102CYDR102C 333 nt-0.02□□□□□ -2.41
SWI1P09547 YNL028WYNL028W 318 nt-0.02□□□□□ -2.41
SWI1P09547 YOR072W-BYOR072W-B 162 nt-0.03□□□□□ -2.41
SWI1P09547 YDR183C-AYDR183C-A 258 nt-0.04□□□□□ -2.42
SWI1P09547 YEL073CYEL073C 324 nt-0.04□□□□□ -2.42
SWI1P09547 YPL038W-AYPL038W-A 192 nt-0.04□□□□□ -2.42
SWI1P09547 YGL149WYGL149W 306 nt-0.05□□□□□ -2.42
SWI1P09547 YMR193C-AYMR193C-A 387 nt-0.05□□□□□ -2.42
SWI1P09547 YGR069WYGR069W 336 nt-0.06□□□□□ -2.42
SWI1P09547 YDR118W-AYDR118W-A 117 nt-0.07□□□□□ -2.42
SWI1P09547 YBR072C-AYBR072C-A 162 nt-0.07□□□□□ -2.42
SWI1P09547 YPR170W-AYPR170W-A 186 nt-0.07□□□□□ -2.42
SWI1P09547 YAF9YNL107W 681 nt-0.08□□□□□ -2.42
SWI1P09547 YLR232WYLR232W 348 nt-0.09□□□□□ -2.42
SWI1P09547 YPR012WYPR012W 255 nt-0.1□□□□□ -2.42
SWI1P09547 YPR197CYPR197C 564 nt-0.1□□□□□ -2.42
SWI1P09547 SOV1YMR066W 2697 nt-0.1□□□□□ -2.42
SWI1P09547 MYO1YHR023W 5787 nt-0.1□□□□□ -2.43
SWI1P09547 YER053C-AYER053C-A 114 nt-0.11□□□□□ -2.43
SWI1P09547 ATP6Q0085 780 nt-0.12□□□□□ -2.43
SWI1P09547 YFL019CYFL019C 354 nt-0.12□□□□□ -2.43
SWI1P09547 YMR158W-BYMR158W-B 321 nt-0.12□□□□□ -2.43
SWI1P09547 GLG1YKR058W 1851 nt-0.12□□□□□ -2.43
SWI1P09547 TFB5YDR079C-A 219 nt-0.13□□□□□ -2.43
SWI1P09547 snR36snR36 182 nt-0.13□□□□□ -2.43
SWI1P09547 RPM2YML091C 3609 nt-0.13□□□□□ -2.43
SWI1P09547 YIL002W-AYIL002W-A 210 nt-0.14□□□□□ -2.43
SWI1P09547 YLR120W-AYLR120W-A 102 nt-0.14□□□□□ -2.43
SWI1P09547 snR128snR128 126 nt-0.16□□□□□ -2.44
SWI1P09547 HMRA1YCR097W 381 nt-0.17□□□□□ -2.44
SWI1P09547 YDL240C-AYDL240C-A 138 nt-0.17□□□□□ -2.44
SWI1P09547 YDR210WYDR210W 228 nt-0.17□□□□□ -2.44
SWI1P09547 YGR164WYGR164W 336 nt-0.17□□□□□ -2.44
SWI1P09547 YBR099CYBR099C 384 nt-0.17□□□□□ -2.44
SWI1P09547 snR8snR8 190 nt-0.18□□□□□ -2.44
SWI1P09547 RPL39YJL189W 156 nt-0.18□□□□□ -2.44
SWI1P09547 YOR015WYOR015W 360 nt-0.18□□□□□ -2.44
SWI1P09547 snR46snR46 197 nt-0.2□□□□□ -2.44
SWI1P09547 YFL032WYFL032W 321 nt-0.21□□□□□ -2.44
SWI1P09547 YCR038W-AYCR038W-A 126 nt-0.22□□□□□ -2.44
SWI1P09547 SDH6YDR379C-A 240 nt-0.22□□□□□ -2.44
SWI1P09547 APQ12YIL040W 417 nt-0.22□□□□□ -2.44
SWI1P09547 YMR172C-AYMR172C-A 384 nt-0.22□□□□□ -2.44
SWI1P09547 URB1YKL014C 5295 nt-0.23□□□□□ -2.45
SWI1P09547 YGL052WYGL052W 306 nt-0.23□□□□□ -2.45
SWI1P09547 YOR008C-AYOR008C-A 225 nt-0.23□□□□□ -2.45
SWI1P09547 YKL118WYKL118W 312 nt-0.24□□□□□ -2.45
SWI1P09547 RAD61YDR014W 1944 nt-0.24□□□□□ -2.45
SWI1P09547 snR74snR74 88 nt-0.26□□□□□ -2.45
SWI1P09547 EST1YLR233C 2100 nt-0.27□□□□□ -2.45
SWI1P09547 YDR413CYDR413C 576 nt-0.29□□□□□ -2.46
SWI1P09547 GIM4YEL003W 336 nt-0.3□□□□□ -2.46
SWI1P09547 SBH2YER019C-A 267 nt-0.3□□□□□ -2.46
SWI1P09547 YIR030W-AYIR030W-A 384 nt-0.3□□□□□ -2.46
SWI1P09547 YER097WYER097W 330 nt-0.31□□□□□ -2.46
SWI1P09547 COG6YNL041C 2520 nt-0.32□□□□□ -2.46
SWI1P09547 SEC10YLR166C 2616 nt-0.33□□□□□ -2.46
SWI1P09547 YDR544CYDR544C 429 nt-0.35□□□□□ -2.46
SWI1P09547 YBL039C-AYBL039C-A 84 nt-0.37□□□□□ -2.47
SWI1P09547 YBR182C-AYBR182C-A 195 nt-0.38□□□□□ -2.47
SWI1P09547 YOR314W-AYOR314W-A 111 nt-0.38□□□□□ -2.47
SWI1P09547 YPL060C-AYPL060C-A 3315 nt-0.39□□□□□ -2.47
SWI1P09547 YML099W-AYML099W-A 330 nt-0.4□□□□□ -2.47
SWI1P09547 YNL277W-AYNL277W-A 189 nt-0.41□□□□□ -2.48
SWI1P09547 tF(GAA)QtF(GAA)Q 75 nt-0.43□□□□□ -2.48
SWI1P09547 YER181CYER181C 324 nt-0.43□□□□□ -2.48
SWI1P09547 YGL041CYGL041C 204 nt-0.44□□□□□ -2.48
SWI1P09547 YGL182CYGL182C 324 nt-0.44□□□□□ -2.48
SWI1P09547 YJL077W-AYJL077W-A 87 nt-0.47□□□□□ -2.48
SWI1P09547 snR55snR55 98 nt-0.48□□□□□ -2.49
SWI1P09547 YPR010C-AYPR010C-A 219 nt-0.49□□□□□ -2.49
SWI1P09547 YHR175W-AYHR175W-A 150 nt-0.5□□□□□ -2.49
SWI1P09547 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
SWI1P09547 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
SWI1P09547 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
SWI1P09547 YIL071W-AYIL071W-A 477 nt-0.53□□□□□ -2.49
SWI1P09547 snR49snR49 165 nt-0.53□□□□□ -2.49
SWI1P09547 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
SWI1P09547 snR65snR65 100 nt-0.56□□□□□ -2.5
SWI1P09547 YML100W-AYML100W-A 174 nt-0.56□□□□□ -2.5
SWI1P09547 YOR381W-AYOR381W-A 168 nt-0.56□□□□□ -2.5
SWI1P09547 snR56snR56 88 nt-0.57□□□□□ -2.5
SWI1P09547 YJL182CYJL182C 318 nt-0.58□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 37 ms