Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm27743-201ENSMUST00000185136 126 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm18727-201ENSMUST00000185981 553 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm43142-201ENSMUST00000198670 361 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm45080-201ENSMUST00000206648 283 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm39147-201ENSMUST00000211376 465 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm21007-201ENSMUST00000221024 326 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm24254-201ENSMUST00000083702 104 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm24987-201ENSMUST00000104453 134 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm11577-201ENSMUST00000118030 737 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm14898-201ENSMUST00000120202 645 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm13502-201ENSMUST00000121574 684 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm12693-201ENSMUST00000121965 483 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm23183-201ENSMUST00000122595 323 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm22380-201ENSMUST00000157479 95 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm25977-201ENSMUST00000158697 85 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm25835-201ENSMUST00000158917 144 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm9379-201ENSMUST00000196790 646 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm35570-201ENSMUST00000198730 681 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm19709-201ENSMUST00000215403 482 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm46194-201ENSMUST00000218136 320 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm18388-201ENSMUST00000222339 557 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Mir323-201ENSMUST00000083683 86 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm10161-201ENSMUST00000091506 204 ntBASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim3Q9R1R2 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Mir693-201ENSMUST00000102187 89 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm14518-201ENSMUST00000117351 542 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm12782-201ENSMUST00000117519 727 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm11367-201ENSMUST00000117802 120 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm15231-201ENSMUST00000119174 447 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm6071-201ENSMUST00000119561 440 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm14739-201ENSMUST00000120424 802 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm14578-201ENSMUST00000122166 391 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm22521-201ENSMUST00000158272 134 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm26005-201ENSMUST00000158802 134 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm28688-201ENSMUST00000187301 268 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm6140-201ENSMUST00000192494 966 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm44016-201ENSMUST00000203463 164 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm44058-201ENSMUST00000204335 467 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm18268-201ENSMUST00000208445 943 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm45273-201ENSMUST00000211559 281 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm5265-201ENSMUST00000076828 342 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Gm22293-201ENSMUST00000083314 109 ntBASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim3Q9R1R2 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms