Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Mir6411-201ENSMUST00000183556 108 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm38213-201ENSMUST00000193203 173 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm37097-201ENSMUST00000193676 336 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm37428-201ENSMUST00000193886 137 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm44634-201ENSMUST00000206119 152 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm18015-201ENSMUST00000214879 316 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm35262-201ENSMUST00000215133 267 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm26439-201ENSMUST00000082592 106 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm24147-201ENSMUST00000082763 144 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Mir101b-201ENSMUST00000083622 97 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm23850-201ENSMUST00000083830 169 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm13087-201ENSMUST00000118298 256 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm15854-201ENSMUST00000118879 808 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm16017-201ENSMUST00000119834 208 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm14810-201ENSMUST00000121628 486 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm25967-201ENSMUST00000157168 147 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm22186-201ENSMUST00000157822 122 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm23592-201ENSMUST00000157859 117 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm24553-201ENSMUST00000158653 131 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm23312-201ENSMUST00000158774 102 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm23773-201ENSMUST00000158985 296 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm17061-201ENSMUST00000163167 499 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm38281-201ENSMUST00000192301 315 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm2189-201ENSMUST00000201419 429 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm25630-201ENSMUST00000084000 162 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.2□□□□□ -1.9
Trim3Q9R1R2 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm24890-201ENSMUST00000104389 102 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm13076-201ENSMUST00000118041 204 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm12722-201ENSMUST00000118507 493 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm15988-201ENSMUST00000118677 367 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm23754-201ENSMUST00000157576 63 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm27592-201ENSMUST00000157729 126 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm22174-201ENSMUST00000175050 125 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm22692-201ENSMUST00000175055 125 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm27634-201ENSMUST00000175060 126 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm22460-201ENSMUST00000175269 124 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm25535-201ENSMUST00000175364 125 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm24365-201ENSMUST00000175384 125 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm44310-201ENSMUST00000175424 126 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm22639-201ENSMUST00000175591 125 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm24979-201ENSMUST00000178626 126 ntBASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim3Q9R1R2 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 213.3 ms