Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm26273-201ENSMUST00000104180 131 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm6923-201ENSMUST00000118343 406 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm11403-201ENSMUST00000122195 369 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm14530-201ENSMUST00000122391 333 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm5963-201ENSMUST00000143451 236 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm5368-201ENSMUST00000189012 589 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm43652-201ENSMUST00000196219 675 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm8041-201ENSMUST00000199755 616 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm43424-201ENSMUST00000200484 253 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm45590-201ENSMUST00000209715 262 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Gm25578-201ENSMUST00000083406 104 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Mir504-201ENSMUST00000093602 79 ntBASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Brf1Q8CFK2 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm23273-201ENSMUST00000104058 135 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm22493-201ENSMUST00000104494 132 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm11673-201ENSMUST00000117846 331 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm9308-201ENSMUST00000119073 448 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm12495-201ENSMUST00000119750 447 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm12739-201ENSMUST00000119769 382 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm23206-201ENSMUST00000122720 184 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm25294-201ENSMUST00000122791 104 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm23583-201ENSMUST00000158533 289 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm7241-201ENSMUST00000159853 357 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Mir1251-201ENSMUST00000175486 84 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm8649-201ENSMUST00000181799 233 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Mir6345-201ENSMUST00000184286 128 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Mir3620-201ENSMUST00000184710 61 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm20811-201ENSMUST00000190500 553 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm37869-201ENSMUST00000193385 595 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm7726-201ENSMUST00000206241 231 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm44650-201ENSMUST00000206929 194 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm17890-201ENSMUST00000221419 757 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Snord38a-201ENSMUST00000083746 71 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.76□□□□□ -1.65
Brf1Q8CFK2 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Brf1Q8CFK2 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm14867-201ENSMUST00000120156 866 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm23228-201ENSMUST00000157296 270 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm24850-201ENSMUST00000158029 119 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm21070-201ENSMUST00000182425 985 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm27828-201ENSMUST00000184108 119 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm7624-201ENSMUST00000209702 435 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm18602-201ENSMUST00000209794 851 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm31849-201ENSMUST00000220306 375 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Gm7240-201ENSMUST00000220769 664 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Mir99a-201ENSMUST00000083596 65 ntBASIC4.75□□□□□ -1.65
Brf1Q8CFK2 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 237.9 ms