Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm22561-201ENSMUST00000157331 84 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm25438-201ENSMUST00000158281 110 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm19203-201ENSMUST00000174049 939 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm26141-201ENSMUST00000175299 126 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm24520-201ENSMUST00000179510 110 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm28141-201ENSMUST00000186676 342 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm17966-201ENSMUST00000193453 594 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm43115-201ENSMUST00000196244 160 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm43039-201ENSMUST00000202883 963 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm19253-201ENSMUST00000204279 307 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.23□□□□□ -1.89
Trim3Q9R1R2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim3Q9R1R2 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm25764-201ENSMUST00000104092 134 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm9157-201ENSMUST00000117673 225 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm15195-201ENSMUST00000118775 263 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm11913-201ENSMUST00000119094 336 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm5762-201ENSMUST00000119204 258 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm14008-201ENSMUST00000120483 274 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm16458-201ENSMUST00000121428 502 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm14564-201ENSMUST00000122159 294 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm23755-201ENSMUST00000157578 343 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Mir5127-201ENSMUST00000175295 71 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm20811-201ENSMUST00000190500 553 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm38231-201ENSMUST00000192030 347 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm36943-201ENSMUST00000194422 282 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm43239-201ENSMUST00000200131 201 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm35876-201ENSMUST00000205044 459 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm23925-201ENSMUST00000082471 132 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim3Q9R1R2 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trim3Q9R1R2 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Trim3Q9R1R2 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trim3Q9R1R2 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm25272-201ENSMUST00000104293 128 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm11252-201ENSMUST00000120572 939 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm15799-201ENSMUST00000120899 289 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm6591-201ENSMUST00000121063 434 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm23716-201ENSMUST00000157348 144 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm25572-201ENSMUST00000157527 172 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm24008-201ENSMUST00000157733 138 ntBASIC3.21□□□□□ -1.9
Trim3Q9R1R2 Gm23775-201ENSMUST00000158991 249 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms