Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29216-201ENSMUST00000187117 492 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm28924-201ENSMUST00000190012 241 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Mir5121-201ENSMUST00000198528 74 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Trav15d-3-201ENSMUST00000198604 167 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm7468-201ENSMUST00000203900 652 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm44961-201ENSMUST00000207450 196 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm8745-201ENSMUST00000207846 782 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm2446-201ENSMUST00000220144 772 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm13664-201ENSMUST00000117304 345 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm13567-201ENSMUST00000118026 247 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm12878-201ENSMUST00000118744 332 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm14669-201ENSMUST00000118841 250 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm12095-201ENSMUST00000121962 816 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm24690-201ENSMUST00000157759 97 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Trbv11-201ENSMUST00000194354 260 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm37353-201ENSMUST00000194497 313 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm45023-201ENSMUST00000207951 379 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm6112-201ENSMUST00000208037 629 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 AC160962.2-201ENSMUST00000224761 632 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm5548-201ENSMUST00000055878 397 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm25200-201ENSMUST00000083094 130 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm25481-201ENSMUST00000083221 158 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm23503-201ENSMUST00000083903 107 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Brf1Q8CFK2 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm22269-201ENSMUST00000104002 130 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm42606-201ENSMUST00000114209 239 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm15994-201ENSMUST00000118029 402 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm11830-201ENSMUST00000120175 561 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm11645-201ENSMUST00000121589 649 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm25784-201ENSMUST00000122524 81 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm24503-201ENSMUST00000158454 135 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm2862-201ENSMUST00000161524 328 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm4248-201ENSMUST00000196905 316 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm45400-201ENSMUST00000211603 653 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.78□□□□□ -1.64
Brf1Q8CFK2 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.78□□□□□ -1.64
Brf1Q8CFK2 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms