Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm24264-201ENSMUST00000179835 94 ntBASIC5.6□□□□□ -1.51
Hoxb3P09026 Gm20257-202ENSMUST00000188643 130 ntBASIC5.6□□□□□ -1.51
Hoxb3P09026 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.6□□□□□ -1.51
Hoxb3P09026 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxb3P09026 AC192091.2-201ENSMUST00000217869 117 ntBASIC5.6□□□□□ -1.51
Hoxb3P09026 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.6□□□□□ -1.51
Hoxb3P09026 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxb3P09026 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxb3P09026 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Hoxb3P09026 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxb3P09026 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxb3P09026 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxb3P09026 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxb3P09026 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxb3P09026 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxb3P09026 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxb3P09026 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm12495-201ENSMUST00000119750 447 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm11819-201ENSMUST00000122192 372 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm23219-201ENSMUST00000158123 87 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm16303-201ENSMUST00000161498 390 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm25450-201ENSMUST00000179144 107 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm1833-201ENSMUST00000191608 682 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm43436-201ENSMUST00000199308 147 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm44650-201ENSMUST00000206929 194 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm45315-201ENSMUST00000209283 333 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm10033-201ENSMUST00000072427 1813 ntBASIC5.59□□□□□ -1.51
Hoxb3P09026 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hoxb3P09026 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.59□□□□□ -1.52
Hoxb3P09026 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Hoxb3P09026 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
Hoxb3P09026 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm14304-201ENSMUST00000117272 446 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm11774-201ENSMUST00000118601 293 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm6071-201ENSMUST00000119561 440 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm14714-201ENSMUST00000119743 439 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm22984-201ENSMUST00000122751 122 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm25664-201ENSMUST00000157697 107 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm22650-201ENSMUST00000175138 105 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm22395-201ENSMUST00000177427 96 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm43078-201ENSMUST00000197222 168 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm32222-201ENSMUST00000203296 298 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm8719-201ENSMUST00000203602 534 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm22807-201ENSMUST00000082737 129 ntBASIC5.58□□□□□ -1.52
Hoxb3P09026 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxb3P09026 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxb3P09026 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxb3P09026 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxb3P09026 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxb3P09026 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hoxb3P09026 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxb3P09026 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxb3P09026 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.57□□□□□ -1.52
Hoxb3P09026 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxb3P09026 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 180.2 ms