Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm23867-201ENSMUST00000122649 274 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm24382-201ENSMUST00000122698 107 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm22158-201ENSMUST00000158411 126 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm28534-201ENSMUST00000187744 676 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm18660-201ENSMUST00000199542 629 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm15936-201ENSMUST00000118706 460 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm15061-201ENSMUST00000121076 1046 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm29610-201ENSMUST00000187749 453 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm38076-201ENSMUST00000193889 450 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Mir21a-201ENSMUST00000083521 92 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Mir410-201ENSMUST00000083563 81 ntBASIC2.79□□□□□ -1.96
Col4a4Q9QZR9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Neat1-201ENSMUST00000173672 20771 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm22534-201ENSMUST00000158173 104 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm28146-201ENSMUST00000185517 701 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm3496-201ENSMUST00000188283 745 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm29335-201ENSMUST00000188361 459 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Trbv27-201ENSMUST00000193711 277 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm19761-201ENSMUST00000205372 391 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm19269-201ENSMUST00000211401 804 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm18899-201ENSMUST00000217663 546 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm18026-201ENSMUST00000222789 727 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm5374-201ENSMUST00000222868 657 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 LOC667541-201ENSMUST00000223408 278 ntBASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col4a4Q9QZR9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Col4a4Q9QZR9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm15785-201ENSMUST00000119145 694 ntBASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm22764-201ENSMUST00000158370 92 ntBASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm20074-201ENSMUST00000208144 484 ntBASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.77□□□□□ -1.97
Col4a4Q9QZR9 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm26143-201ENSMUST00000104480 108 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm15530-201ENSMUST00000122206 555 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm25106-201ENSMUST00000122672 134 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm23116-201ENSMUST00000158481 67 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm45879-201ENSMUST00000212521 392 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms