Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm28146-201ENSMUST00000185517 701 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm28574-201ENSMUST00000185757 699 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm28397-201ENSMUST00000187970 699 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm29366-201ENSMUST00000190481 699 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm34015-201ENSMUST00000194908 451 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm43853-201ENSMUST00000197162 301 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm44923-201ENSMUST00000206673 85 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm3442-201ENSMUST00000216808 710 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AC117202.3-201ENSMUST00000228532 310 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm11372-201ENSMUST00000117348 570 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm15025-201ENSMUST00000118434 418 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm13852-201ENSMUST00000122350 242 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm23538-201ENSMUST00000157535 101 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm26320-201ENSMUST00000157742 306 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm24901-201ENSMUST00000158125 110 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm22836-201ENSMUST00000158441 61 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm25194-201ENSMUST00000177987 79 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm26177-201ENSMUST00000178683 107 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm26988-201ENSMUST00000183296 945 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Mir6393-201ENSMUST00000183709 94 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm28404-201ENSMUST00000190242 453 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm17906-201ENSMUST00000202480 901 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm29884-201ENSMUST00000218403 453 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm29774-201ENSMUST00000219270 436 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 CT572983.1-201ENSMUST00000226895 514 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm23242-201ENSMUST00000083055 107 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm23677-201ENSMUST00000083156 104 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm22287-201ENSMUST00000083197 107 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm23455-201ENSMUST00000083331 100 ntBASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.86□□□□□ -1.63
Brf1Q8CFK2 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Mir551b-201ENSMUST00000102165 98 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Gm12884-201ENSMUST00000120371 325 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Gm24306-201ENSMUST00000180229 79 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Mir7074-201ENSMUST00000183884 63 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.85□□□□□ -1.63
Brf1Q8CFK2 Gm36953-201ENSMUST00000195295 268 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms