Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm44054-201ENSMUST00000203814 372 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm45387-201ENSMUST00000209792 632 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm45588-201ENSMUST00000211213 630 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm20368-201ENSMUST00000220716 301 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm6474-201ENSMUST00000223250 699 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm22572-201ENSMUST00000082985 105 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm23677-201ENSMUST00000083156 104 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm23503-201ENSMUST00000083903 107 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Olfr575-201ENSMUST00000084812 957 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Rnft1Q9DCN7 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Mir105-201ENSMUST00000104655 80 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Mir466j-201ENSMUST00000116876 122 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm3267-201ENSMUST00000118671 473 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm14520-201ENSMUST00000119258 387 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm25808-201ENSMUST00000122784 284 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Mir3062-201ENSMUST00000174986 105 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm26866-201ENSMUST00000180414 802 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm27676-201ENSMUST00000183669 61 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm27551-201ENSMUST00000184258 77 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm28629-201ENSMUST00000187309 263 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm43510-201ENSMUST00000197922 353 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm18258-201ENSMUST00000210413 542 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm45523-201ENSMUST00000210712 799 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm45402-201ENSMUST00000211796 223 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm19256-201ENSMUST00000218550 231 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.42□□□□□ -1.7
Rnft1Q9DCN7 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Mir466b-8-201ENSMUST00000103883 86 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm24079-201ENSMUST00000104352 132 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm13650-201ENSMUST00000117729 433 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Mir3090-201ENSMUST00000175597 87 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm25412-201ENSMUST00000180258 107 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm28872-201ENSMUST00000191518 158 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm37743-201ENSMUST00000194645 376 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Mir466e-201ENSMUST00000198862 84 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm43825-201ENSMUST00000199650 734 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm45590-201ENSMUST00000209715 262 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 419.1 ms