Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Brf1Q8CFK2 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Brf1Q8CFK2 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.9□□□□□ -1.63
Brf1Q8CFK2 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm24318-201ENSMUST00000104490 131 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm12252-201ENSMUST00000119517 219 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm14605-201ENSMUST00000120599 268 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm15267-201ENSMUST00000120888 464 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm11506-201ENSMUST00000122414 470 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm22080-201ENSMUST00000157591 106 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm17155-201ENSMUST00000165969 473 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm17421-201ENSMUST00000167845 674 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm28666-201ENSMUST00000186649 274 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm17946-201ENSMUST00000186856 538 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm28661-201ENSMUST00000188231 681 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm30280-201ENSMUST00000192214 262 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm5552-201ENSMUST00000197149 515 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm42451-201ENSMUST00000197410 244 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm45048-201ENSMUST00000207058 429 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm45049-201ENSMUST00000207586 591 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm44852-201ENSMUST00000207950 369 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm18488-201ENSMUST00000215082 364 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm18703-201ENSMUST00000215318 333 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm5917-201ENSMUST00000217638 721 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm19441-201ENSMUST00000221545 330 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm46369-201ENSMUST00000221577 401 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm26206-201ENSMUST00000082908 110 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.89□□□□□ -1.63
Brf1Q8CFK2 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 AC163660.3-201ENSMUST00000224253 1563 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm11219-201ENSMUST00000118565 358 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm14292-201ENSMUST00000118761 456 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm22765-201ENSMUST00000158371 128 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm27695-201ENSMUST00000184301 91 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm4644-201ENSMUST00000197587 400 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm42990-201ENSMUST00000199231 312 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm42458-201ENSMUST00000201914 369 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Gm44754-201ENSMUST00000208155 400 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Brf1Q8CFK2 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm22472-201ENSMUST00000104115 134 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm23481-201ENSMUST00000104173 131 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm23322-201ENSMUST00000104464 167 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm12564-201ENSMUST00000119860 321 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm12900-201ENSMUST00000120919 573 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm13973-201ENSMUST00000121371 894 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm14362-201ENSMUST00000121679 273 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm15254-201ENSMUST00000149567 273 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm25163-201ENSMUST00000158905 104 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm11394-201ENSMUST00000181421 517 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm9892-201ENSMUST00000182415 992 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Gm8151-201ENSMUST00000184817 871 ntBASIC4.87□□□□□ -1.63
Brf1Q8CFK2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms