Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Gm42438-201ENSMUST00000197832 974 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Gm30155-201ENSMUST00000223458 339 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Brf1Q8CFK2 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm15075-201ENSMUST00000122187 477 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm25177-201ENSMUST00000122634 117 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm24724-201ENSMUST00000158230 107 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm21758-201ENSMUST00000179336 819 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm27313-201ENSMUST00000183500 142 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Mir6414-201ENSMUST00000183685 82 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm28304-201ENSMUST00000185977 312 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm29647-201ENSMUST00000188795 666 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm29256-201ENSMUST00000189094 312 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm28337-201ENSMUST00000190425 666 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm28484-201ENSMUST00000190606 312 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm28504-201ENSMUST00000190977 666 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm31511-201ENSMUST00000193134 657 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm37300-201ENSMUST00000193327 280 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm35843-201ENSMUST00000193716 666 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm43007-201ENSMUST00000197618 291 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm44348-201ENSMUST00000200165 122 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm20304-201ENSMUST00000218168 444 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm29809-201ENSMUST00000218423 493 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm46312-201ENSMUST00000220961 420 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC159619.2-201ENSMUST00000222924 401 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC122393.1-201ENSMUST00000226570 319 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm7117-201ENSMUST00000071515 387 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm25126-201ENSMUST00000083343 102 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.93□□□□□ -1.62
Brf1Q8CFK2 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm14142-201ENSMUST00000117833 296 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm12268-201ENSMUST00000118398 442 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm13627-201ENSMUST00000119700 706 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm23118-201ENSMUST00000122657 187 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm23905-201ENSMUST00000157568 109 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm20415-201ENSMUST00000172877 423 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm20612-201ENSMUST00000176318 236 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm28615-201ENSMUST00000187527 482 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.92□□□□□ -1.62
Brf1Q8CFK2 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 176.6 ms