Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm23322-201ENSMUST00000104464 167 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Snora64-201ENSMUST00000104521 134 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm14366-201ENSMUST00000121970 730 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm23867-201ENSMUST00000122649 274 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm26352-201ENSMUST00000158223 125 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm23215-201ENSMUST00000178153 121 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm17946-201ENSMUST00000186856 538 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm29552-201ENSMUST00000190548 660 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm18291-201ENSMUST00000190791 301 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm37300-201ENSMUST00000193327 280 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm19131-201ENSMUST00000203408 789 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm4045-201ENSMUST00000204076 310 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm7039-201ENSMUST00000205138 346 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Olfr936-202ENSMUST00000216912 937 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim9Q8C7M3 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.55□□□□□ -1.68
Trim9Q8C7M3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm13009-201ENSMUST00000121307 267 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm12755-201ENSMUST00000122297 282 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm23789-201ENSMUST00000122536 301 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm25163-201ENSMUST00000158905 104 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Mir3104-201ENSMUST00000174911 63 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm19932-201ENSMUST00000177033 313 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm23619-201ENSMUST00000178411 94 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm25474-201ENSMUST00000179052 94 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm22047-201ENSMUST00000179176 94 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm29524-201ENSMUST00000190819 699 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm44654-201ENSMUST00000208052 329 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm7117-201ENSMUST00000071515 387 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm22265-201ENSMUST00000082947 116 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Neat1-201ENSMUST00000173672 20771 ntBASIC4.54□□□□□ -1.68
Trim9Q8C7M3 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim9Q8C7M3 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm25213-201ENSMUST00000102388 113 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm22472-201ENSMUST00000104115 134 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm24608-201ENSMUST00000104381 136 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm22488-201ENSMUST00000116811 127 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm12386-201ENSMUST00000117380 688 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm25427-201ENSMUST00000157605 103 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim9Q8C7M3 Gm29848-201ENSMUST00000203107 295 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 531 ms