Protein–RNA interactions for Protein: Q08887

NDD1, Nuclear division defective protein 1, yeastyeast

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDD1Q08887 PAA1YDR071C 576 nt1.54□□□□□ -2.16
NDD1Q08887 YDR354C-AYDR354C-A 144 nt1.54□□□□□ -2.16
NDD1Q08887 PKH2YOL100W 3246 nt1.54□□□□□ -2.16
NDD1Q08887 SEY1YOR165W 2331 nt1.54□□□□□ -2.16
NDD1Q08887 YFR012W-AYFR012W-A 87 nt1.53□□□□□ -2.16
NDD1Q08887 YHR217CYHR217C 462 nt1.53□□□□□ -2.16
NDD1Q08887 CTR9YOL145C 3234 nt1.53□□□□□ -2.16
NDD1Q08887 MSH6YDR097C 3729 nt1.53□□□□□ -2.17
NDD1Q08887 YGR109W-BYGR109W-B 4644 nt1.52□□□□□ -2.17
NDD1Q08887 ATG9YDL149W 2994 nt1.52□□□□□ -2.17
NDD1Q08887 FRK1YPL141C 2598 nt1.52□□□□□ -2.17
NDD1Q08887 tL(UAA)QtL(UAA)Q 85 nt1.52□□□□□ -2.17
NDD1Q08887 YBR206WYBR206W 324 nt1.52□□□□□ -2.17
NDD1Q08887 YLR422WYLR422W 5799 nt1.52□□□□□ -2.17
NDD1Q08887 MDS3YGL197W 4464 nt1.52□□□□□ -2.17
NDD1Q08887 PDR8YLR266C 2106 nt1.52□□□□□ -2.17
NDD1Q08887 CHS1YNL192W 3396 nt1.51□□□□□ -2.17
NDD1Q08887 IFH1YLR223C 3258 nt1.51□□□□□ -2.17
NDD1Q08887 YDR521WYDR521W 336 nt1.51□□□□□ -2.17
NDD1Q08887 COX12YLR038C 252 nt1.51□□□□□ -2.17
NDD1Q08887 YBR099CYBR099C 384 nt1.51□□□□□ -2.17
NDD1Q08887 COG4YPR105C 2586 nt1.51□□□□□ -2.17
NDD1Q08887 HIR3YJR140C 4947 nt1.5□□□□□ -2.17
NDD1Q08887 YCR095W-AYCR095W-A 159 nt1.5□□□□□ -2.17
NDD1Q08887 TMA7YLR262C-A 195 nt1.5□□□□□ -2.17
NDD1Q08887 YMR175W-AYMR175W-A 195 nt1.5□□□□□ -2.17
NDD1Q08887 YMR247W-AYMR247W-A 144 nt1.5□□□□□ -2.17
NDD1Q08887 YNL144CYNL144C 2223 nt1.5□□□□□ -2.17
NDD1Q08887 LHS1YKL073W 2646 nt1.49□□□□□ -2.17
NDD1Q08887 UTP21YLR409C 2820 nt1.49□□□□□ -2.17
NDD1Q08887 SLI15YBR156C 2097 nt1.49□□□□□ -2.17
NDD1Q08887 YDL247W-AYDL247W-A 75 nt1.48□□□□□ -2.17
NDD1Q08887 YJL026C-AYJL026C-A 222 nt1.48□□□□□ -2.17
NDD1Q08887 MGA2YIR033W 3342 nt1.47□□□□□ -2.17
NDD1Q08887 YOR019WYOR019W 2193 nt1.47□□□□□ -2.17
NDD1Q08887 PRP5YBR237W 2550 nt1.47□□□□□ -2.17
NDD1Q08887 MSH3YCR092C 3057 nt1.46□□□□□ -2.18
NDD1Q08887 PMD1YER132C 5262 nt1.46□□□□□ -2.18
NDD1Q08887 TDA9YML081W 3756 nt1.46□□□□□ -2.18
NDD1Q08887 snR61snR61 90 nt1.45□□□□□ -2.18
NDD1Q08887 CMC4YMR194C-B 222 nt1.45□□□□□ -2.18
NDD1Q08887 TTI1YKL033W 3117 nt1.45□□□□□ -2.18
NDD1Q08887 OST4YDL232W 111 nt1.44□□□□□ -2.18
NDD1Q08887 tT(UGU)HtT(UGU)H 72 nt1.44□□□□□ -2.18
NDD1Q08887 YLL054CYLL054C 2532 nt1.44□□□□□ -2.18
NDD1Q08887 APL1YJR005W 2103 nt1.43□□□□□ -2.18
NDD1Q08887 NUP157YER105C 4176 nt1.43□□□□□ -2.18
NDD1Q08887 IRA1YBR140C 9279 nt1.43□□□□□ -2.18
NDD1Q08887 ADR1YDR216W 3972 nt1.43□□□□□ -2.18
NDD1Q08887 YIL002W-AYIL002W-A 210 nt1.43□□□□□ -2.18
NDD1Q08887 YNL067W-BYNL067W-B 141 nt1.43□□□□□ -2.18
NDD1Q08887 YNL211CYNL211C 261 nt1.43□□□□□ -2.18
NDD1Q08887 SEC63YOR254C 1992 nt1.43□□□□□ -2.18
NDD1Q08887 YJR039WYJR039W 3366 nt1.42□□□□□ -2.18
NDD1Q08887 SPO24YPR036W-A 204 nt1.42□□□□□ -2.18
NDD1Q08887 YLR035C-AYLR035C-A 3468 nt1.42□□□□□ -2.18
NDD1Q08887 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
NDD1Q08887 SAC3YDR159W 3906 nt1.41□□□□□ -2.18
NDD1Q08887 YDL206WYDL206W 2289 nt1.41□□□□□ -2.18
NDD1Q08887 TBS1YBR150C 3285 nt1.4□□□□□ -2.19
NDD1Q08887 SBH1YER087C-B 249 nt1.4□□□□□ -2.19
NDD1Q08887 YLR282CYLR282C 342 nt1.4□□□□□ -2.19
NDD1Q08887 CHS6YJL099W 2241 nt1.4□□□□□ -2.19
NDD1Q08887 RAD50YNL250W 3939 nt1.4□□□□□ -2.19
NDD1Q08887 UTP8YGR128C 2142 nt1.39□□□□□ -2.19
NDD1Q08887 SOM1YEL059C-A 225 nt1.39□□□□□ -2.19
NDD1Q08887 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
NDD1Q08887 STB6YKL072W 2301 nt1.38□□□□□ -2.19
NDD1Q08887 SMC1YFL008W 3678 nt1.38□□□□□ -2.19
NDD1Q08887 YGR130CYGR130C 2451 nt1.38□□□□□ -2.19
NDD1Q08887 YGL041C-BYGL041C-B 183 nt1.37□□□□□ -2.19
NDD1Q08887 YGL182CYGL182C 324 nt1.37□□□□□ -2.19
NDD1Q08887 YAL067W-AYAL067W-A 228 nt1.37□□□□□ -2.19
NDD1Q08887 PKH3YDR466W 2697 nt1.36□□□□□ -2.19
NDD1Q08887 YGL123C-AYGL123C-A 231 nt1.36□□□□□ -2.19
NDD1Q08887 MON2YNL297C 4911 nt1.36□□□□□ -2.19
NDD1Q08887 YOR161W-AYOR161W-A 81 nt1.35□□□□□ -2.19
NDD1Q08887 SMC4YLR086W 4257 nt1.35□□□□□ -2.19
NDD1Q08887 UFD2YDL190C 2886 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)E1tH(GUG)E1 72 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)E2tH(GUG)E2 72 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)G1tH(GUG)G1 72 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)G2tH(GUG)G2 72 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)HtH(GUG)H 72 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)KtH(GUG)K 72 nt1.34□□□□□ -2.19
NDD1Q08887 tH(GUG)MtH(GUG)M 72 nt1.34□□□□□ -2.19
NDD1Q08887 YHR131W-AYHR131W-A 246 nt1.34□□□□□ -2.19
NDD1Q08887 BFR2YDR299W 1605 nt1.33□□□□□ -2.2
NDD1Q08887 RCO1YMR075W 2055 nt1.33□□□□□ -2.2
NDD1Q08887 SSK2YNR031C 4740 nt1.33□□□□□ -2.2
NDD1Q08887 POL5YEL055C 3069 nt1.33□□□□□ -2.2
NDD1Q08887 QCR9YGR183C 201 nt1.33□□□□□ -2.2
NDD1Q08887 YBL039C-AYBL039C-A 84 nt1.33□□□□□ -2.2
NDD1Q08887 snR39BsnR39B 96 nt1.33□□□□□ -2.2
NDD1Q08887 RSM22YKL155C 1887 nt1.33□□□□□ -2.2
NDD1Q08887 SKI3YPR189W 4299 nt1.32□□□□□ -2.2
NDD1Q08887 EAF1YDR359C 2949 nt1.32□□□□□ -2.2
NDD1Q08887 snR14snR14 160 nt1.32□□□□□ -2.2
NDD1Q08887 CDC25YLR310C 4770 nt1.32□□□□□ -2.2
NDD1Q08887 NUT1YGL151W 3399 nt1.31□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 50.1 ms