Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YKL083WYKL083W 615 nt-0.12□□□□□ -2.43
HRD1Q08109 NIP1YMR309C 2439 nt-0.13□□□□□ -2.43
HRD1Q08109 tN(GUU)QtN(GUU)Q 71 nt-0.13□□□□□ -2.43
HRD1Q08109 YOR011W-AYOR011W-A 207 nt-0.13□□□□□ -2.43
HRD1Q08109 YPR002C-AYPR002C-A 198 nt-0.13□□□□□ -2.43
HRD1Q08109 snR45snR45 172 nt-0.13□□□□□ -2.43
HRD1Q08109 DIE2YGR227W 1578 nt-0.14□□□□□ -2.43
HRD1Q08109 EAF6YJR082C 342 nt-0.14□□□□□ -2.43
HRD1Q08109 TAR1YLR154W-C 375 nt-0.14□□□□□ -2.43
HRD1Q08109 MRPL50YNR022C 420 nt-0.14□□□□□ -2.43
HRD1Q08109 YKL123WYKL123W 381 nt-0.15□□□□□ -2.43
HRD1Q08109 AIM29YKR074W 468 nt-0.15□□□□□ -2.43
HRD1Q08109 YPL225WYPL225W 441 nt-0.15□□□□□ -2.43
HRD1Q08109 YML007C-AYML007C-A 111 nt-0.16□□□□□ -2.44
HRD1Q08109 SGF11YPL047W 300 nt-0.16□□□□□ -2.44
HRD1Q08109 YKU70YMR284W 1809 nt-0.17□□□□□ -2.44
HRD1Q08109 FYV7YLR068W 456 nt-0.17□□□□□ -2.44
HRD1Q08109 YNL319WYNL319W 441 nt-0.17□□□□□ -2.44
HRD1Q08109 HMRA2YCR096C 360 nt-0.18□□□□□ -2.44
HRD1Q08109 YDR426CYDR426C 378 nt-0.18□□□□□ -2.44
HRD1Q08109 ISF1YMR081C 1017 nt-0.18□□□□□ -2.44
HRD1Q08109 YMR307C-AYMR307C-A 195 nt-0.18□□□□□ -2.44
HRD1Q08109 YCR018C-AYCR018C-A 255 nt-0.19□□□□□ -2.44
HRD1Q08109 CBS1YDL069C 690 nt-0.19□□□□□ -2.44
HRD1Q08109 YGR174W-AYGR174W-A 87 nt-0.19□□□□□ -2.44
HRD1Q08109 YJL120WYJL120W 324 nt-0.19□□□□□ -2.44
HRD1Q08109 YLR334CYLR334C 381 nt-0.19□□□□□ -2.44
HRD1Q08109 PCF11YDR228C 1881 nt-0.2□□□□□ -2.44
HRD1Q08109 YAR047CYAR047C 321 nt-0.2□□□□□ -2.44
HRD1Q08109 STE18YJR086W 333 nt-0.21□□□□□ -2.44
HRD1Q08109 YCR022CYCR022C 345 nt-0.22□□□□□ -2.44
HRD1Q08109 YHR131W-AYHR131W-A 246 nt-0.22□□□□□ -2.44
HRD1Q08109 RPS25BYLR333C 327 nt-0.22□□□□□ -2.44
HRD1Q08109 YLR456WYLR456W 615 nt-0.22□□□□□ -2.44
HRD1Q08109 YHR130CYHR130C 336 nt-0.23□□□□□ -2.45
HRD1Q08109 YPL068CYPL068C 882 nt-0.23□□□□□ -2.45
HRD1Q08109 YEL073CYEL073C 324 nt-0.24□□□□□ -2.45
HRD1Q08109 YPR092WYPR092W 306 nt-0.24□□□□□ -2.45
HRD1Q08109 snR54snR54 86 nt-0.24□□□□□ -2.45
HRD1Q08109 snR8snR8 190 nt-0.25□□□□□ -2.45
HRD1Q08109 BI2Q0110 1272 nt-0.25□□□□□ -2.45
HRD1Q08109 YLL006W-AYLL006W-A 177 nt-0.25□□□□□ -2.45
HRD1Q08109 YNL303WYNL303W 348 nt-0.25□□□□□ -2.45
HRD1Q08109 YKL136WYKL136W 399 nt-0.26□□□□□ -2.45
HRD1Q08109 PCC1YKR095W-A 267 nt-0.26□□□□□ -2.45
HRD1Q08109 YAR053WYAR053W 297 nt-0.26□□□□□ -2.45
HRD1Q08109 snR78snR78 87 nt-0.28□□□□□ -2.45
HRD1Q08109 YLR282CYLR282C 342 nt-0.28□□□□□ -2.45
HRD1Q08109 YDR210WYDR210W 228 nt-0.29□□□□□ -2.46
HRD1Q08109 ECL1YGR146C 636 nt-0.29□□□□□ -2.46
HRD1Q08109 snR128snR128 126 nt-0.29□□□□□ -2.46
HRD1Q08109 YHR007C-AYHR007C-A 216 nt-0.3□□□□□ -2.46
HRD1Q08109 tR(UCU)Q1tR(UCU)Q1 73 nt-0.3□□□□□ -2.46
HRD1Q08109 YLR101CYLR101C 396 nt-0.3□□□□□ -2.46
HRD1Q08109 TFB5YDR079C-A 219 nt-0.31□□□□□ -2.46
HRD1Q08109 YHR138CYHR138C 345 nt-0.31□□□□□ -2.46
HRD1Q08109 YNL122CYNL122C 348 nt-0.31□□□□□ -2.46
HRD1Q08109 YDR354C-AYDR354C-A 144 nt-0.32□□□□□ -2.46
HRD1Q08109 YER006C-AYER006C-A 318 nt-0.32□□□□□ -2.46
HRD1Q08109 YJL026C-AYJL026C-A 222 nt-0.33□□□□□ -2.46
HRD1Q08109 PRP39YML046W 1890 nt-0.33□□□□□ -2.46
HRD1Q08109 HTB2YBL002W 396 nt-0.35□□□□□ -2.47
HRD1Q08109 YNR025CYNR025C 360 nt-0.35□□□□□ -2.47
HRD1Q08109 SBH2YER019C-A 267 nt-0.36□□□□□ -2.47
HRD1Q08109 YGR164WYGR164W 336 nt-0.36□□□□□ -2.47
HRD1Q08109 YLR041WYLR041W 321 nt-0.36□□□□□ -2.47
HRD1Q08109 TOM22YNL131W 459 nt-0.36□□□□□ -2.47
HRD1Q08109 YOR161W-AYOR161W-A 81 nt-0.36□□□□□ -2.47
HRD1Q08109 snR41snR41 95 nt-0.36□□□□□ -2.47
HRD1Q08109 SNU13YEL026W 381 nt-0.37□□□□□ -2.47
HRD1Q08109 YAR029WYAR029W 225 nt-0.37□□□□□ -2.47
HRD1Q08109 VPS20YMR077C 666 nt-0.37□□□□□ -2.47
HRD1Q08109 CSE1YGL238W 2883 nt-0.38□□□□□ -2.47
HRD1Q08109 CSN9YDR179C 489 nt-0.39□□□□□ -2.47
HRD1Q08109 YBR072C-AYBR072C-A 162 nt-0.4□□□□□ -2.47
HRD1Q08109 YBR099CYBR099C 384 nt-0.4□□□□□ -2.47
HRD1Q08109 YGL123C-AYGL123C-A 231 nt-0.41□□□□□ -2.48
HRD1Q08109 YJL007CYJL007C 315 nt-0.41□□□□□ -2.48
HRD1Q08109 PRM3YPL192C 402 nt-0.41□□□□□ -2.48
HRD1Q08109 YDR366CYDR366C 399 nt-0.42□□□□□ -2.48
HRD1Q08109 YEL020C-BYEL020C-B 198 nt-0.42□□□□□ -2.48
HRD1Q08109 BLI1YKL061W 342 nt-0.42□□□□□ -2.48
HRD1Q08109 YLR434CYLR434C 384 nt-0.43□□□□□ -2.48
HRD1Q08109 YMR158W-BYMR158W-B 321 nt-0.43□□□□□ -2.48
HRD1Q08109 snR46snR46 197 nt-0.44□□□□□ -2.48
HRD1Q08109 SEC10YLR166C 2616 nt-0.45□□□□□ -2.48
HRD1Q08109 YOL013W-BYOL013W-B 291 nt-0.45□□□□□ -2.48
HRD1Q08109 RAD61YDR014W 1944 nt-0.45□□□□□ -2.48
HRD1Q08109 EST1YLR233C 2100 nt-0.46□□□□□ -2.48
HRD1Q08109 YKL100W-AYKL100W-A 90 nt-0.46□□□□□ -2.48
HRD1Q08109 YPL205CYPL205C 345 nt-0.46□□□□□ -2.48
HRD1Q08109 YFL063WYFL063W 456 nt-0.47□□□□□ -2.48
HRD1Q08109 RPS27BYHR021C 249 nt-0.48□□□□□ -2.49
HRD1Q08109 YPL060C-AYPL060C-A 3315 nt-0.49□□□□□ -2.49
HRD1Q08109 YIL115W-AYIL115W-A 372 nt-0.49□□□□□ -2.49
HRD1Q08109 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
HRD1Q08109 GLG1YKR058W 1851 nt-0.51□□□□□ -2.49
HRD1Q08109 YJL113WYJL113W 4647 nt-0.51□□□□□ -2.49
HRD1Q08109 YIR030W-AYIR030W-A 384 nt-0.52□□□□□ -2.49
HRD1Q08109 CSE2YNR010W 450 nt-0.53□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 38.9 ms