Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 YCR018C-AYCR018C-A 255 nt-1.92□□□□□ -2.72
TY1B-DR4Q07793 THG1YGR024C 714 nt-1.92□□□□□ -2.72
TY1B-DR4Q07793 LIN1YHR156C 1023 nt-1.92□□□□□ -2.72
TY1B-DR4Q07793 tT(UGU)Q1tT(UGU)Q1 76 nt-1.92□□□□□ -2.72
TY1B-DR4Q07793 YLR154W-FYLR154W-F 141 nt-1.92□□□□□ -2.72
TY1B-DR4Q07793 BLI1YKL061W 342 nt-1.93□□□□□ -2.72
TY1B-DR4Q07793 VPS20YMR077C 666 nt-1.93□□□□□ -2.72
TY1B-DR4Q07793 YBL039C-AYBL039C-A 84 nt-1.94□□□□□ -2.72
TY1B-DR4Q07793 HUR1YGL168W 333 nt-1.95□□□□□ -2.72
TY1B-DR4Q07793 BER1YLR412W 825 nt-1.95□□□□□ -2.72
TY1B-DR4Q07793 RPS20YHL015W 366 nt-1.96□□□□□ -2.72
TY1B-DR4Q07793 RUF20RUF20 443 nt-1.96□□□□□ -2.72
TY1B-DR4Q07793 LSM4YER112W 564 nt-1.97□□□□□ -2.72
TY1B-DR4Q07793 YHR130CYHR130C 336 nt-1.97□□□□□ -2.72
TY1B-DR4Q07793 YPL182CYPL182C 384 nt-1.97□□□□□ -2.72
TY1B-DR4Q07793 snR5snR5 204 nt-1.99□□□□□ -2.73
TY1B-DR4Q07793 LOC1YFR001W 615 nt-1.99□□□□□ -2.73
TY1B-DR4Q07793 DFG10YIL049W 762 nt-1.99□□□□□ -2.73
TY1B-DR4Q07793 COX7YMR256C 183 nt-1.99□□□□□ -2.73
TY1B-DR4Q07793 YOR011W-AYOR011W-A 207 nt-2.01□□□□□ -2.73
TY1B-DR4Q07793 YDR290WYDR290W 330 nt-2.02□□□□□ -2.73
TY1B-DR4Q07793 RDS3YPR094W 324 nt-2.02□□□□□ -2.73
TY1B-DR4Q07793 VPS63YLR261C 327 nt-2.03□□□□□ -2.73
TY1B-DR4Q07793 YBR072C-AYBR072C-A 162 nt-2.03□□□□□ -2.73
TY1B-DR4Q07793 YPR092WYPR092W 306 nt-2.03□□□□□ -2.73
TY1B-DR4Q07793 snR49snR49 165 nt-2.03□□□□□ -2.73
TY1B-DR4Q07793 YNL067W-AYNL067W-A 147 nt-2.04□□□□□ -2.74
TY1B-DR4Q07793 VAM3YOR106W 852 nt-2.05□□□□□ -2.74
TY1B-DR4Q07793 snR189snR189 189 nt-2.05□□□□□ -2.74
TY1B-DR4Q07793 IRC16YPR038W 360 nt-2.06□□□□□ -2.74
TY1B-DR4Q07793 SPC24YMR117C 642 nt-2.06□□□□□ -2.74
TY1B-DR4Q07793 CUP1-1YHR053C 186 nt-2.07□□□□□ -2.74
TY1B-DR4Q07793 CUP1-2YHR055C 186 nt-2.07□□□□□ -2.74
TY1B-DR4Q07793 YBL107W-AYBL107W-A 105 nt-2.08□□□□□ -2.74
TY1B-DR4Q07793 YOL106WYOL106W 354 nt-2.08□□□□□ -2.74
TY1B-DR4Q07793 EAF6YJR082C 342 nt-2.09□□□□□ -2.74
TY1B-DR4Q07793 YOR366WYOR366W 354 nt-2.09□□□□□ -2.74
TY1B-DR4Q07793 CWC23YGL128C 852 nt-2.1□□□□□ -2.75
TY1B-DR4Q07793 YKL202WYKL202W 582 nt-2.1□□□□□ -2.75
TY1B-DR4Q07793 snR59snR59 78 nt-2.12□□□□□ -2.75
TY1B-DR4Q07793 Q0142Q0142 177 nt-2.12□□□□□ -2.75
TY1B-DR4Q07793 YLR264C-AYLR264C-A 117 nt-2.13□□□□□ -2.75
TY1B-DR4Q07793 YER188C-AYER188C-A 300 nt-2.14□□□□□ -2.75
TY1B-DR4Q07793 YGL015CYGL015C 393 nt-2.14□□□□□ -2.75
TY1B-DR4Q07793 snR72snR72 98 nt-2.15□□□□□ -2.75
TY1B-DR4Q07793 YOR192C-CYOR192C-C 237 nt-2.15□□□□□ -2.75
TY1B-DR4Q07793 SGF11YPL047W 300 nt-2.15□□□□□ -2.75
TY1B-DR4Q07793 YPR010C-AYPR010C-A 219 nt-2.15□□□□□ -2.75
TY1B-DR4Q07793 YDR366CYDR366C 399 nt-2.17□□□□□ -2.76
TY1B-DR4Q07793 SCEIQ0160 708 nt-2.17□□□□□ -2.76
TY1B-DR4Q07793 RPL22BYFL034C-A 369 nt-2.18□□□□□ -2.76
TY1B-DR4Q07793 snR51snR51 107 nt-2.18□□□□□ -2.76
TY1B-DR4Q07793 AIM29YKR074W 468 nt-2.21□□□□□ -2.76
TY1B-DR4Q07793 YOR170WYOR170W 306 nt-2.22□□□□□ -2.76
TY1B-DR4Q07793 POP7YBR167C 423 nt-2.22□□□□□ -2.76
TY1B-DR4Q07793 CBS1YDL069C 690 nt-2.23□□□□□ -2.77
TY1B-DR4Q07793 YGL239CYGL239C 315 nt-2.24□□□□□ -2.77
TY1B-DR4Q07793 ACF4YJR083C 930 nt-2.24□□□□□ -2.77
TY1B-DR4Q07793 YKL063CYKL063C 504 nt-2.24□□□□□ -2.77
TY1B-DR4Q07793 YER135CYER135C 393 nt-2.28□□□□□ -2.77
TY1B-DR4Q07793 MND1YGL183C 660 nt-2.28□□□□□ -2.77
TY1B-DR4Q07793 YOR293C-AYOR293C-A 150 nt-2.28□□□□□ -2.77
TY1B-DR4Q07793 YMR304C-AYMR304C-A 351 nt-2.28□□□□□ -2.77
TY1B-DR4Q07793 SDH6YDR379C-A 240 nt-2.29□□□□□ -2.78
TY1B-DR4Q07793 HMLALPHA2YCL067C 633 nt-2.3□□□□□ -2.78
TY1B-DR4Q07793 MATALPHA2YCR039C 633 nt-2.3□□□□□ -2.78
TY1B-DR4Q07793 HMRA2YCR096C 360 nt-2.3□□□□□ -2.78
TY1B-DR4Q07793 YPT6YLR262C 648 nt-2.3□□□□□ -2.78
TY1B-DR4Q07793 snR74snR74 88 nt-2.31□□□□□ -2.78
TY1B-DR4Q07793 YGL052WYGL052W 306 nt-2.31□□□□□ -2.78
TY1B-DR4Q07793 YNL171CYNL171C 369 nt-2.31□□□□□ -2.78
TY1B-DR4Q07793 YNL058CYNL058C 951 nt-2.32□□□□□ -2.78
TY1B-DR4Q07793 SRB7YDR308C 423 nt-2.33□□□□□ -2.78
TY1B-DR4Q07793 ZEO1YOL109W 342 nt-2.34□□□□□ -2.78
TY1B-DR4Q07793 snR81snR81 201 nt-2.35□□□□□ -2.78
TY1B-DR4Q07793 ILM1YJR118C 612 nt-2.35□□□□□ -2.78
TY1B-DR4Q07793 FYV7YLR068W 456 nt-2.35□□□□□ -2.78
TY1B-DR4Q07793 YPR016W-AYPR016W-A 261 nt-2.36□□□□□ -2.79
TY1B-DR4Q07793 YER053C-AYER053C-A 114 nt-2.37□□□□□ -2.79
TY1B-DR4Q07793 YOR364WYOR364W 369 nt-2.37□□□□□ -2.79
TY1B-DR4Q07793 YLR334CYLR334C 381 nt-2.42□□□□□ -2.8
TY1B-DR4Q07793 YGL230CYGL230C 444 nt-2.42□□□□□ -2.8
TY1B-DR4Q07793 YKL100W-AYKL100W-A 90 nt-2.43□□□□□ -2.8
TY1B-DR4Q07793 YFR009W-AYFR009W-A 258 nt-2.44□□□□□ -2.8
TY1B-DR4Q07793 CDC65tQ(CUG)M 72 nt-2.44□□□□□ -2.8
TY1B-DR4Q07793 YAR029WYAR029W 225 nt-2.44□□□□□ -2.8
TY1B-DR4Q07793 BUD26YDR241W 288 nt-2.45□□□□□ -2.8
TY1B-DR4Q07793 YGR025WYGR025W 303 nt-2.45□□□□□ -2.8
TY1B-DR4Q07793 YNL146C-AYNL146C-A 195 nt-2.45□□□□□ -2.8
TY1B-DR4Q07793 YCR001WYCR001W 315 nt-2.49□□□□□ -2.81
TY1B-DR4Q07793 YDR354C-AYDR354C-A 144 nt-2.5□□□□□ -2.81
TY1B-DR4Q07793 YHR050W-AYHR050W-A 171 nt-2.5□□□□□ -2.81
TY1B-DR4Q07793 YIR021W-AYIR021W-A 213 nt-2.5□□□□□ -2.81
TY1B-DR4Q07793 JLP2YMR132C 627 nt-2.5□□□□□ -2.81
TY1B-DR4Q07793 YBR285WYBR285W 435 nt-2.5□□□□□ -2.81
TY1B-DR4Q07793 YJR087WYJR087W 351 nt-2.51□□□□□ -2.81
TY1B-DR4Q07793 YOR121CYOR121C 306 nt-2.51□□□□□ -2.81
TY1B-DR4Q07793 YHR125WYHR125W 306 nt-2.53□□□□□ -2.81
TY1B-DR4Q07793 YPL229WYPL229W 621 nt-2.53□□□□□ -2.81
TY1B-DR4Q07793 YMR013C-AYMR013C-A 150 nt-2.53□□□□□ -2.82
Retrieved 100 of 7,029 protein–RNA pairs in 87.9 ms