Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 YEL025CYEL025C 3567 nt3.46□□□□□ -1.86
PTP3P40048 PMR1YGL167C 2853 nt3.46□□□□□ -1.86
PTP3P40048 PET309YLR067C 2898 nt3.45□□□□□ -1.86
PTP3P40048 KRE33YNL132W 3171 nt3.44□□□□□ -1.86
PTP3P40048 LCL1YPL056C 306 nt3.43□□□□□ -1.86
PTP3P40048 STU1YBL034C 4542 nt3.43□□□□□ -1.86
PTP3P40048 ARP8YOR141C 2646 nt3.42□□□□□ -1.86
PTP3P40048 YER172C-AYER172C-A 381 nt3.42□□□□□ -1.86
PTP3P40048 SEY1YOR165W 2331 nt3.42□□□□□ -1.86
PTP3P40048 RGA1YOR127W 3024 nt3.41□□□□□ -1.86
PTP3P40048 YPR097WYPR097W 3222 nt3.41□□□□□ -1.86
PTP3P40048 YLR422WYLR422W 5799 nt3.41□□□□□ -1.86
PTP3P40048 TIM9YEL020W-A 264 nt3.4□□□□□ -1.87
PTP3P40048 SEC10YLR166C 2616 nt3.4□□□□□ -1.87
PTP3P40048 COA6YMR244C-A 315 nt3.4□□□□□ -1.87
PTP3P40048 SEC21YNL287W 2808 nt3.4□□□□□ -1.87
PTP3P40048 YKL225WYKL225W 348 nt3.39□□□□□ -1.87
PTP3P40048 KIP1YBL063W 3336 nt3.39□□□□□ -1.87
PTP3P40048 WAR1YML076C 2835 nt3.38□□□□□ -1.87
PTP3P40048 SPO14YKR031C 5052 nt3.37□□□□□ -1.87
PTP3P40048 RTT101YJL047C 2529 nt3.37□□□□□ -1.87
PTP3P40048 SFB2YNL049C 2631 nt3.37□□□□□ -1.87
PTP3P40048 GCN1YGL195W 8019 nt3.36□□□□□ -1.87
PTP3P40048 MMS4YBR098W 2076 nt3.36□□□□□ -1.87
PTP3P40048 PDR1YGL013C 3207 nt3.36□□□□□ -1.87
PTP3P40048 SEC31YDL195W 3822 nt3.35□□□□□ -1.87
PTP3P40048 BCK1YJL095W 4437 nt3.35□□□□□ -1.87
PTP3P40048 SMC1YFL008W 3678 nt3.34□□□□□ -1.88
PTP3P40048 NUP159YIL115C 4383 nt3.33□□□□□ -1.88
PTP3P40048 UBR1YGR184C 5853 nt3.33□□□□□ -1.88
PTP3P40048 SPO24YPR036W-A 204 nt3.32□□□□□ -1.88
PTP3P40048 SNQ2YDR011W 4506 nt3.31□□□□□ -1.88
PTP3P40048 AZF1YOR113W 2745 nt3.31□□□□□ -1.88
PTP3P40048 MOT1YPL082C 5604 nt3.3□□□□□ -1.88
PTP3P40048 ANS1YHR126C 480 nt3.29□□□□□ -1.88
PTP3P40048 UFD4YKL010C 4452 nt3.29□□□□□ -1.88
PTP3P40048 BMS1YPL217C 3552 nt3.28□□□□□ -1.88
PTP3P40048 RPN1YHR027C 2982 nt3.28□□□□□ -1.88
PTP3P40048 TAO3YIL129C 7131 nt3.27□□□□□ -1.89
PTP3P40048 SLH1YGR271W 5904 nt3.26□□□□□ -1.89
PTP3P40048 UTP21YLR409C 2820 nt3.26□□□□□ -1.89
PTP3P40048 TOF1YNL273W 3717 nt3.26□□□□□ -1.89
PTP3P40048 RPL26BYGR034W 384 nt3.25□□□□□ -1.89
PTP3P40048 YBR200W-AYBR200W-A 165 nt3.25□□□□□ -1.89
PTP3P40048 STT4YLR305C 5703 nt3.25□□□□□ -1.89
PTP3P40048 NUP170YBL079W 4509 nt3.25□□□□□ -1.89
PTP3P40048 NUP157YER105C 4176 nt3.24□□□□□ -1.89
PTP3P40048 EMC5YIL027C 426 nt3.24□□□□□ -1.89
PTP3P40048 YDR464C-AYDR464C-A 189 nt3.22□□□□□ -1.89
PTP3P40048 SAP1YER047C 2694 nt3.22□□□□□ -1.89
PTP3P40048 AXL1YPR122W 3627 nt3.21□□□□□ -1.9
PTP3P40048 GYP5YPL249C 2685 nt3.19□□□□□ -1.9
PTP3P40048 YSP2YDR326C 4317 nt3.18□□□□□ -1.9
PTP3P40048 NNF2YGR089W 2811 nt3.18□□□□□ -1.9
PTP3P40048 MSB1YOR188W 3414 nt3.18□□□□□ -1.9
PTP3P40048 SCD5YOR329C 2619 nt3.17□□□□□ -1.9
PTP3P40048 YAR009CYAR009C 3591 nt3.17□□□□□ -1.9
PTP3P40048 HIR3YJR140C 4947 nt3.17□□□□□ -1.9
PTP3P40048 snR190snR190 190 nt3.16□□□□□ -1.9
PTP3P40048 CHS1YNL192W 3396 nt3.15□□□□□ -1.9
PTP3P40048 KCS1YDR017C 3153 nt3.14□□□□□ -1.91
PTP3P40048 RIF1YBR275C 5751 nt3.14□□□□□ -1.91
PTP3P40048 MGA2YIR033W 3342 nt3.14□□□□□ -1.91
PTP3P40048 PIK1YNL267W 3201 nt3.12□□□□□ -1.91
PTP3P40048 tD(GUC)QtD(GUC)Q 75 nt3.11□□□□□ -1.91
PTP3P40048 CLU1YMR012W 3834 nt3.11□□□□□ -1.91
PTP3P40048 YLR299C-AYLR299C-A 93 nt3.1□□□□□ -1.91
PTP3P40048 PDR11YIL013C 4236 nt3.1□□□□□ -1.91
PTP3P40048 HER1YOR227W 3741 nt3.09□□□□□ -1.91
PTP3P40048 GIP3YPL137C 3831 nt3.09□□□□□ -1.91
PTP3P40048 KOG1YHR186C 4674 nt3.08□□□□□ -1.92
PTP3P40048 YDL159W-AYDL159W-A 132 nt3.08□□□□□ -1.92
PTP3P40048 YEF3YLR249W 3135 nt3.06□□□□□ -1.92
PTP3P40048 YOR055WYOR055W 435 nt3.06□□□□□ -1.92
PTP3P40048 BPT1YLL015W 4680 nt3.06□□□□□ -1.92
PTP3P40048 YPL060C-AYPL060C-A 3315 nt3.06□□□□□ -1.92
PTP3P40048 YJL052C-AYJL052C-A 120 nt3.05□□□□□ -1.92
PTP3P40048 UBP2YOR124C 3819 nt3.05□□□□□ -1.92
PTP3P40048 BRE1YDL074C 2103 nt3.04□□□□□ -1.92
PTP3P40048 RAV1YJR033C 4074 nt3.04□□□□□ -1.92
PTP3P40048 PKH3YDR466W 2697 nt3.03□□□□□ -1.92
PTP3P40048 RAD50YNL250W 3939 nt3.03□□□□□ -1.92
PTP3P40048 IRC20YLR247C 4671 nt3.03□□□□□ -1.92
PTP3P40048 DYN1YKR054C 12279 nt3.01□□□□□ -1.93
PTP3P40048 SKI7YOR076C 2244 nt3.01□□□□□ -1.93
PTP3P40048 SPF1YEL031W 3648 nt3.01□□□□□ -1.93
PTP3P40048 TFC3YAL001C 3483 nt3□□□□□ -1.93
PTP3P40048 AI1Q0050 2505 nt3□□□□□ -1.93
PTP3P40048 NST1YNL091W 3723 nt2.99□□□□□ -1.93
PTP3P40048 RPL41AYDL184C 78 nt2.99□□□□□ -1.93
PTP3P40048 POL2YNL262W 6669 nt2.99□□□□□ -1.93
PTP3P40048 SMC4YLR086W 4257 nt2.99□□□□□ -1.93
PTP3P40048 SKI3YPR189W 4299 nt2.99□□□□□ -1.93
PTP3P40048 ATG9YDL149W 2994 nt2.98□□□□□ -1.93
PTP3P40048 SEC3YER008C 4011 nt2.98□□□□□ -1.93
PTP3P40048 snR38snR38 95 nt2.97□□□□□ -1.93
PTP3P40048 PEP1YBL017C 4740 nt2.97□□□□□ -1.93
PTP3P40048 YDR209CYDR209C 414 nt2.96□□□□□ -1.94
PTP3P40048 YBR296C-AYBR296C-A 120 nt2.95□□□□□ -1.94
PTP3P40048 KAP122YGL016W 3246 nt2.94□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms