Protein–RNA interactions for Protein: P39705

NUP60, Nucleoporin NUP60, yeastyeast

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP60P39705 MDS3YGL197W 4464 nt1.78□□□□□ -2.12
NUP60P39705 YBR221W-AYBR221W-A 105 nt1.78□□□□□ -2.12
NUP60P39705 PAA1YDR071C 576 nt1.77□□□□□ -2.13
NUP60P39705 TDA9YML081W 3756 nt1.77□□□□□ -2.13
NUP60P39705 YLR419WYLR419W 4308 nt1.76□□□□□ -2.13
NUP60P39705 DNF3YMR162C 4971 nt1.76□□□□□ -2.13
NUP60P39705 snR85snR85 171 nt1.76□□□□□ -2.13
NUP60P39705 COX12YLR038C 252 nt1.76□□□□□ -2.13
NUP60P39705 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
NUP60P39705 YCR038W-AYCR038W-A 126 nt1.75□□□□□ -2.13
NUP60P39705 RAD50YNL250W 3939 nt1.75□□□□□ -2.13
NUP60P39705 YDL206WYDL206W 2289 nt1.74□□□□□ -2.13
NUP60P39705 NUT1YGL151W 3399 nt1.74□□□□□ -2.13
NUP60P39705 APL1YJR005W 2103 nt1.73□□□□□ -2.13
NUP60P39705 YHL015W-AYHL015W-A 84 nt1.73□□□□□ -2.13
NUP60P39705 EMC5YIL027C 426 nt1.73□□□□□ -2.13
NUP60P39705 COA6YMR244C-A 315 nt1.72□□□□□ -2.13
NUP60P39705 YOR102WYOR102W 351 nt1.72□□□□□ -2.13
NUP60P39705 TTI1YKL033W 3117 nt1.72□□□□□ -2.13
NUP60P39705 MON2YNL297C 4911 nt1.7□□□□□ -2.14
NUP60P39705 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
NUP60P39705 CTF4YPR135W 2784 nt1.7□□□□□ -2.14
NUP60P39705 UFD2YDL190C 2886 nt1.68□□□□□ -2.14
NUP60P39705 YIL002W-AYIL002W-A 210 nt1.68□□□□□ -2.14
NUP60P39705 YAL067W-AYAL067W-A 228 nt1.68□□□□□ -2.14
NUP60P39705 YNL211CYNL211C 261 nt1.68□□□□□ -2.14
NUP60P39705 SLX4YLR135W 2247 nt1.68□□□□□ -2.14
NUP60P39705 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
NUP60P39705 ALY2YJL084C 3141 nt1.68□□□□□ -2.14
NUP60P39705 SMC4YLR086W 4257 nt1.68□□□□□ -2.14
NUP60P39705 IRA1YBR140C 9279 nt1.67□□□□□ -2.14
NUP60P39705 MMS4YBR098W 2076 nt1.67□□□□□ -2.14
NUP60P39705 YOR314W-AYOR314W-A 111 nt1.66□□□□□ -2.14
NUP60P39705 snR14snR14 160 nt1.66□□□□□ -2.14
NUP60P39705 PRP5YBR237W 2550 nt1.65□□□□□ -2.14
NUP60P39705 SKI3YPR189W 4299 nt1.65□□□□□ -2.14
NUP60P39705 PAN2YGL094C 3348 nt1.65□□□□□ -2.15
NUP60P39705 CHS1YNL192W 3396 nt1.64□□□□□ -2.15
NUP60P39705 YJL022WYJL022W 309 nt1.64□□□□□ -2.15
NUP60P39705 POL5YEL055C 3069 nt1.64□□□□□ -2.15
NUP60P39705 KCS1YDR017C 3153 nt1.63□□□□□ -2.15
NUP60P39705 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
NUP60P39705 CDC31YOR257W 486 nt1.63□□□□□ -2.15
NUP60P39705 YAR009CYAR009C 3591 nt1.63□□□□□ -2.15
NUP60P39705 YLL054CYLL054C 2532 nt1.62□□□□□ -2.15
NUP60P39705 YER053C-AYER053C-A 114 nt1.62□□□□□ -2.15
NUP60P39705 RSM22YKL155C 1887 nt1.61□□□□□ -2.15
NUP60P39705 YFR012W-AYFR012W-A 87 nt1.61□□□□□ -2.15
NUP60P39705 YGL123C-AYGL123C-A 231 nt1.61□□□□□ -2.15
NUP60P39705 YCL001W-BYCL001W-B 255 nt1.61□□□□□ -2.15
NUP60P39705 YOR019WYOR019W 2193 nt1.61□□□□□ -2.15
NUP60P39705 PET127YOR017W 2403 nt1.6□□□□□ -2.15
NUP60P39705 SMC1YFL008W 3678 nt1.6□□□□□ -2.15
NUP60P39705 FIG2YCR089W 4830 nt1.6□□□□□ -2.15
NUP60P39705 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
NUP60P39705 BRR2YER172C 6492 nt1.59□□□□□ -2.15
NUP60P39705 tL(UAA)QtL(UAA)Q 85 nt1.59□□□□□ -2.15
NUP60P39705 YOR161W-AYOR161W-A 81 nt1.57□□□□□ -2.16
NUP60P39705 KAP122YGL016W 3246 nt1.57□□□□□ -2.16
NUP60P39705 FYV8YGR196C 2454 nt1.57□□□□□ -2.16
NUP60P39705 BFR2YDR299W 1605 nt1.56□□□□□ -2.16
NUP60P39705 UTP8YGR128C 2142 nt1.56□□□□□ -2.16
NUP60P39705 tQ(UUG)E2tQ(UUG)E2 72 nt1.56□□□□□ -2.16
NUP60P39705 MSH3YCR092C 3057 nt1.56□□□□□ -2.16
NUP60P39705 STO1YMR125W 2586 nt1.55□□□□□ -2.16
NUP60P39705 PMD1YER132C 5262 nt1.55□□□□□ -2.16
NUP60P39705 YGL182CYGL182C 324 nt1.55□□□□□ -2.16
NUP60P39705 TRM732YMR259C 4263 nt1.54□□□□□ -2.16
NUP60P39705 SET3YKR029C 2256 nt1.54□□□□□ -2.16
NUP60P39705 COX5BYIL111W 456 nt1.54□□□□□ -2.16
NUP60P39705 YKL100W-AYKL100W-A 90 nt1.54□□□□□ -2.16
NUP60P39705 YOR329W-AYOR329W-A 210 nt1.54□□□□□ -2.16
NUP60P39705 YLL020CYLL020C 306 nt1.53□□□□□ -2.16
NUP60P39705 CMC4YMR194C-B 222 nt1.53□□□□□ -2.16
NUP60P39705 YLR422WYLR422W 5799 nt1.53□□□□□ -2.17
NUP60P39705 CHS6YJL099W 2241 nt1.52□□□□□ -2.17
NUP60P39705 NUP157YER105C 4176 nt1.52□□□□□ -2.17
NUP60P39705 PIK1YNL267W 3201 nt1.52□□□□□ -2.17
NUP60P39705 BST1YFL025C 3090 nt1.52□□□□□ -2.17
NUP60P39705 YLR282CYLR282C 342 nt1.52□□□□□ -2.17
NUP60P39705 YCS4YLR272C 3531 nt1.52□□□□□ -2.17
NUP60P39705 CCH1YGR217W 6120 nt1.52□□□□□ -2.17
NUP60P39705 EAF1YDR359C 2949 nt1.51□□□□□ -2.17
NUP60P39705 WAR1YML076C 2835 nt1.51□□□□□ -2.17
NUP60P39705 YBL039C-AYBL039C-A 84 nt1.5□□□□□ -2.17
NUP60P39705 NOP9YJL010C 2001 nt1.5□□□□□ -2.17
NUP60P39705 SXM1YDR395W 2835 nt1.49□□□□□ -2.17
NUP60P39705 YML002WYML002W 2214 nt1.48□□□□□ -2.17
NUP60P39705 SSK2YNR031C 4740 nt1.48□□□□□ -2.17
NUP60P39705 STB6YKL072W 2301 nt1.48□□□□□ -2.17
NUP60P39705 GEA2YEL022W 4380 nt1.48□□□□□ -2.17
NUP60P39705 APL3YBL037W 3078 nt1.47□□□□□ -2.17
NUP60P39705 SWI4YER111C 3282 nt1.47□□□□□ -2.17
NUP60P39705 TAH1YCR060W 336 nt1.47□□□□□ -2.17
NUP60P39705 YGR130CYGR130C 2451 nt1.46□□□□□ -2.18
NUP60P39705 SAC3YDR159W 3906 nt1.46□□□□□ -2.18
NUP60P39705 OST4YDL232W 111 nt1.44□□□□□ -2.18
NUP60P39705 YIL071W-AYIL071W-A 477 nt1.44□□□□□ -2.18
NUP60P39705 YBR099CYBR099C 384 nt1.44□□□□□ -2.18
NUP60P39705 SPC110YDR356W 2835 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 158.4 ms