Protein–RNA interactions for Protein: P39081

PCF11, Protein PCF11, yeastyeast

Predicted RBP Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCF11P39081 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
PCF11P39081 VIK1YPL253C 1944 nt1.11□□□□□ -2.23
PCF11P39081 ALG13YGL047W 609 nt1.1□□□□□ -2.23
PCF11P39081 YHL042WYHL042W 453 nt1.1□□□□□ -2.23
PCF11P39081 YBR200W-AYBR200W-A 165 nt1.1□□□□□ -2.23
PCF11P39081 NST1YNL091W 3723 nt1.1□□□□□ -2.23
PCF11P39081 APL1YJR005W 2103 nt1.09□□□□□ -2.23
PCF11P39081 YOR011W-AYOR011W-A 207 nt1.09□□□□□ -2.23
PCF11P39081 ECM12YHR021W-A 456 nt1.08□□□□□ -2.24
PCF11P39081 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
PCF11P39081 GEA2YEL022W 4380 nt1.07□□□□□ -2.24
PCF11P39081 BEM2YER155C 6504 nt1.07□□□□□ -2.24
PCF11P39081 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
PCF11P39081 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
PCF11P39081 RAD61YDR014W 1944 nt1.07□□□□□ -2.24
PCF11P39081 WAR1YML076C 2835 nt1.06□□□□□ -2.24
PCF11P39081 snR65snR65 100 nt1.06□□□□□ -2.24
PCF11P39081 YMR321CYMR321C 318 nt1.06□□□□□ -2.24
PCF11P39081 YNL277W-AYNL277W-A 189 nt1.06□□□□□ -2.24
PCF11P39081 CSE2YNR010W 450 nt1.06□□□□□ -2.24
PCF11P39081 YOR015WYOR015W 360 nt1.06□□□□□ -2.24
PCF11P39081 KAP120YPL125W 3099 nt1.05□□□□□ -2.24
PCF11P39081 YGR069WYGR069W 336 nt1.05□□□□□ -2.24
PCF11P39081 RPS27BYHR021C 249 nt1.05□□□□□ -2.24
PCF11P39081 YOR231C-AYOR231C-A 201 nt1.05□□□□□ -2.24
PCF11P39081 MCM10YIL150C 1716 nt1.03□□□□□ -2.24
PCF11P39081 SGF11YPL047W 300 nt1.03□□□□□ -2.24
PCF11P39081 YDL073WYDL073W 2955 nt1.02□□□□□ -2.25
PCF11P39081 OLI1Q0130 231 nt1.02□□□□□ -2.25
PCF11P39081 YNL028WYNL028W 318 nt1.02□□□□□ -2.25
PCF11P39081 YOR218CYOR218C 420 nt1.02□□□□□ -2.25
PCF11P39081 IES4YOR189W 351 nt1.01□□□□□ -2.25
PCF11P39081 YPR117WYPR117W 7470 nt1.01□□□□□ -2.25
PCF11P39081 YLR120W-AYLR120W-A 102 nt1□□□□□ -2.25
PCF11P39081 YOL014WYOL014W 375 nt1□□□□□ -2.25
PCF11P39081 YEL020C-BYEL020C-B 198 nt0.99□□□□□ -2.25
PCF11P39081 PRP16YKR086W 3216 nt0.98□□□□□ -2.25
PCF11P39081 YMR172C-AYMR172C-A 384 nt0.98□□□□□ -2.25
PCF11P39081 YNL211CYNL211C 261 nt0.98□□□□□ -2.25
PCF11P39081 YER181CYER181C 324 nt0.97□□□□□ -2.25
PCF11P39081 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
PCF11P39081 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
PCF11P39081 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
PCF11P39081 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
PCF11P39081 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
PCF11P39081 YIL142C-AYIL142C-A 333 nt0.97□□□□□ -2.25
PCF11P39081 YDR354C-AYDR354C-A 144 nt0.96□□□□□ -2.26
PCF11P39081 YGL052WYGL052W 306 nt0.96□□□□□ -2.26
PCF11P39081 CMC4YMR194C-B 222 nt0.96□□□□□ -2.26
PCF11P39081 YDL196WYDL196W 330 nt0.95□□□□□ -2.26
PCF11P39081 ISD11YER048W-A 285 nt0.95□□□□□ -2.26
PCF11P39081 YFR012W-AYFR012W-A 87 nt0.95□□□□□ -2.26
PCF11P39081 YJL197C-AYJL197C-A 282 nt0.95□□□□□ -2.26
PCF11P39081 YOR008C-AYOR008C-A 225 nt0.95□□□□□ -2.26
PCF11P39081 ASE1YOR058C 2658 nt0.95□□□□□ -2.26
PCF11P39081 SMC1YFL008W 3678 nt0.95□□□□□ -2.26
PCF11P39081 BIR1YJR089W 2865 nt0.94□□□□□ -2.26
PCF11P39081 NOP9YJL010C 2001 nt0.94□□□□□ -2.26
PCF11P39081 YPL152W-AYPL152W-A 99 nt0.94□□□□□ -2.26
PCF11P39081 YMR160WYMR160W 2451 nt0.94□□□□□ -2.26
PCF11P39081 snR74snR74 88 nt0.93□□□□□ -2.26
PCF11P39081 YPR092WYPR092W 306 nt0.93□□□□□ -2.26
PCF11P39081 RKR1YMR247C 4689 nt0.92□□□□□ -2.26
PCF11P39081 YLL019W-AYLL019W-A 93 nt0.92□□□□□ -2.26
PCF11P39081 BFR2YDR299W 1605 nt0.92□□□□□ -2.26
PCF11P39081 YJL026C-AYJL026C-A 222 nt0.91□□□□□ -2.26
PCF11P39081 YPL044CYPL044C 549 nt0.91□□□□□ -2.26
PCF11P39081 MYO1YHR023W 5787 nt0.91□□□□□ -2.26
PCF11P39081 YDL185C-AYDL185C-A 228 nt0.9□□□□□ -2.27
PCF11P39081 YML099W-AYML099W-A 330 nt0.9□□□□□ -2.27
PCF11P39081 YOR282WYOR282W 321 nt0.89□□□□□ -2.27
PCF11P39081 YAL067W-AYAL067W-A 228 nt0.88□□□□□ -2.27
PCF11P39081 PAA1YDR071C 576 nt0.87□□□□□ -2.27
PCF11P39081 PMP1YCR024C-A 123 nt0.86□□□□□ -2.27
PCF11P39081 YKL145W-AYKL145W-A 93 nt0.86□□□□□ -2.27
PCF11P39081 snR49snR49 165 nt0.86□□□□□ -2.27
PCF11P39081 YGL041CYGL041C 204 nt0.85□□□□□ -2.27
PCF11P39081 YOR072W-BYOR072W-B 162 nt0.85□□□□□ -2.27
PCF11P39081 tF(GAA)QtF(GAA)Q 75 nt0.84□□□□□ -2.27
PCF11P39081 YMR307C-AYMR307C-A 195 nt0.84□□□□□ -2.27
PCF11P39081 YCR022CYCR022C 345 nt0.83□□□□□ -2.28
PCF11P39081 RPL26BYGR034W 384 nt0.83□□□□□ -2.28
PCF11P39081 YHR063W-AYHR063W-A 336 nt0.82□□□□□ -2.28
PCF11P39081 NPR2YEL062W 1848 nt0.81□□□□□ -2.28
PCF11P39081 YCR018C-AYCR018C-A 255 nt0.81□□□□□ -2.28
PCF11P39081 YIR030W-AYIR030W-A 384 nt0.81□□□□□ -2.28
PCF11P39081 COY1YKL179C 2040 nt0.81□□□□□ -2.28
PCF11P39081 snR55snR55 98 nt0.79□□□□□ -2.28
PCF11P39081 YOR161W-AYOR161W-A 81 nt0.79□□□□□ -2.28
PCF11P39081 snR190snR190 190 nt0.79□□□□□ -2.28
PCF11P39081 snR80snR80 171 nt0.78□□□□□ -2.28
PCF11P39081 YGL188C-AYGL188C-A 141 nt0.78□□□□□ -2.28
PCF11P39081 ABF2YMR072W 552 nt0.78□□□□□ -2.28
PCF11P39081 YIL134C-AYIL134C-A 204 nt0.77□□□□□ -2.29
PCF11P39081 YLR282CYLR282C 342 nt0.77□□□□□ -2.29
PCF11P39081 YOL155W-AYOL155W-A 135 nt0.77□□□□□ -2.29
PCF11P39081 CHS6YJL099W 2241 nt0.77□□□□□ -2.29
PCF11P39081 YOR345CYOR345C 351 nt0.76□□□□□ -2.29
PCF11P39081 YBR182C-AYBR182C-A 195 nt0.76□□□□□ -2.29
PCF11P39081 YKU70YMR284W 1809 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 98.1 ms