Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 SEC8YPR055W 3198 nt0.22□□□□□ -2.37
CUE1P38428 OST4YDL232W 111 nt0.22□□□□□ -2.37
CUE1P38428 YDR426CYDR426C 378 nt0.22□□□□□ -2.37
CUE1P38428 YER078W-AYER078W-A 165 nt0.21□□□□□ -2.38
CUE1P38428 YHL046W-AYHL046W-A 327 nt0.21□□□□□ -2.38
CUE1P38428 YAL067W-AYAL067W-A 228 nt0.21□□□□□ -2.38
CUE1P38428 YOR053WYOR053W 342 nt0.21□□□□□ -2.38
CUE1P38428 MLP1YKR095W 5628 nt0.2□□□□□ -2.38
CUE1P38428 COX5BYIL111W 456 nt0.2□□□□□ -2.38
CUE1P38428 YLR399W-AYLR399W-A 105 nt0.2□□□□□ -2.38
CUE1P38428 PRP42YDR235W 1635 nt0.19□□□□□ -2.38
CUE1P38428 YOR011W-AYOR011W-A 207 nt0.18□□□□□ -2.38
CUE1P38428 HMRA2YCR096C 360 nt0.17□□□□□ -2.38
CUE1P38428 YLR334CYLR334C 381 nt0.17□□□□□ -2.38
CUE1P38428 YOL013W-AYOL013W-A 192 nt0.17□□□□□ -2.38
CUE1P38428 PCC1YKR095W-A 267 nt0.16□□□□□ -2.38
CUE1P38428 TAR1YLR154W-C 375 nt0.16□□□□□ -2.38
CUE1P38428 ATP19YOL077W-A 207 nt0.16□□□□□ -2.38
CUE1P38428 YPL225WYPL225W 441 nt0.16□□□□□ -2.38
CUE1P38428 YDL185C-AYDL185C-A 228 nt0.14□□□□□ -2.39
CUE1P38428 YJL120WYJL120W 324 nt0.14□□□□□ -2.39
CUE1P38428 YOR345CYOR345C 351 nt0.14□□□□□ -2.39
CUE1P38428 YPL068CYPL068C 882 nt0.14□□□□□ -2.39
CUE1P38428 SGF11YPL047W 300 nt0.13□□□□□ -2.39
CUE1P38428 snR189snR189 189 nt0.13□□□□□ -2.39
CUE1P38428 RPS25BYLR333C 327 nt0.11□□□□□ -2.39
CUE1P38428 RCO1YMR075W 2055 nt0.1□□□□□ -2.39
CUE1P38428 YLR434CYLR434C 384 nt0.1□□□□□ -2.39
CUE1P38428 YDR371C-AYDR371C-A 105 nt0.09□□□□□ -2.4
CUE1P38428 UTP8YGR128C 2142 nt0.09□□□□□ -2.4
CUE1P38428 snR190snR190 190 nt0.09□□□□□ -2.4
CUE1P38428 ORC3YLL004W 1851 nt0.09□□□□□ -2.4
CUE1P38428 RPS26AYGL189C 360 nt0.08□□□□□ -2.4
CUE1P38428 tN(GUU)QtN(GUU)Q 71 nt0.07□□□□□ -2.4
CUE1P38428 YAL016C-BYAL016C-B 186 nt0.07□□□□□ -2.4
CUE1P38428 VPS20YMR077C 666 nt0.07□□□□□ -2.4
CUE1P38428 YNL303WYNL303W 348 nt0.07□□□□□ -2.4
CUE1P38428 YMR307C-AYMR307C-A 195 nt0.06□□□□□ -2.4
CUE1P38428 NNF2YGR089W 2811 nt0.04□□□□□ -2.4
CUE1P38428 CSN9YDR179C 489 nt0.04□□□□□ -2.4
CUE1P38428 YNL146WYNL146W 303 nt0.04□□□□□ -2.4
CUE1P38428 YCR018C-AYCR018C-A 255 nt0.03□□□□□ -2.4
CUE1P38428 LEE1YPL054W 906 nt0.03□□□□□ -2.4
CUE1P38428 YBL100W-BYBL100W-B 5313 nt0.02□□□□□ -2.41
CUE1P38428 COX12YLR038C 252 nt0.02□□□□□ -2.41
CUE1P38428 snR45snR45 172 nt0.02□□□□□ -2.41
CUE1P38428 NIP1YMR309C 2439 nt0.01□□□□□ -2.41
CUE1P38428 YLR406C-AYLR406C-A 150 nt0.01□□□□□ -2.41
CUE1P38428 YHR138CYHR138C 345 nt0□□□□□ -2.41
CUE1P38428 PRP39YML046W 1890 nt0□□□□□ -2.41
CUE1P38428 YAR029WYAR029W 225 nt-0.01□□□□□ -2.41
CUE1P38428 YCR022CYCR022C 345 nt-0.02□□□□□ -2.41
CUE1P38428 YHR007C-AYHR007C-A 216 nt-0.02□□□□□ -2.41
CUE1P38428 YJL007CYJL007C 315 nt-0.03□□□□□ -2.41
CUE1P38428 COY1YKL179C 2040 nt-0.03□□□□□ -2.41
CUE1P38428 ULI1YFR026C 510 nt-0.04□□□□□ -2.42
CUE1P38428 YDR354C-AYDR354C-A 144 nt-0.05□□□□□ -2.42
CUE1P38428 YJL026C-AYJL026C-A 222 nt-0.05□□□□□ -2.42
CUE1P38428 YKL063CYKL063C 504 nt-0.05□□□□□ -2.42
CUE1P38428 YOR186C-AYOR186C-A 210 nt-0.05□□□□□ -2.42
CUE1P38428 YPR092WYPR092W 306 nt-0.05□□□□□ -2.42
CUE1P38428 YJL113WYJL113W 4647 nt-0.06□□□□□ -2.42
CUE1P38428 YLR282CYLR282C 342 nt-0.06□□□□□ -2.42
CUE1P38428 CSE1YGL238W 2883 nt-0.08□□□□□ -2.42
CUE1P38428 YKU70YMR284W 1809 nt-0.08□□□□□ -2.42
CUE1P38428 YAR053WYAR053W 297 nt-0.08□□□□□ -2.42
CUE1P38428 SOV1YMR066W 2697 nt-0.08□□□□□ -2.42
CUE1P38428 YHR131W-AYHR131W-A 246 nt-0.09□□□□□ -2.42
CUE1P38428 YKL136WYKL136W 399 nt-0.09□□□□□ -2.42
CUE1P38428 COG8YML071C 1824 nt-0.1□□□□□ -2.43
CUE1P38428 RPL35AYDL191W 363 nt-0.1□□□□□ -2.43
CUE1P38428 SSS1YDR086C 243 nt-0.1□□□□□ -2.43
CUE1P38428 PRM3YPL192C 402 nt-0.1□□□□□ -2.43
CUE1P38428 YER079WYER079W 633 nt-0.12□□□□□ -2.43
CUE1P38428 YLL006W-AYLL006W-A 177 nt-0.12□□□□□ -2.43
CUE1P38428 YLR202CYLR202C 327 nt-0.12□□□□□ -2.43
CUE1P38428 HTB2YBL002W 396 nt-0.12□□□□□ -2.43
CUE1P38428 YER137W-AYER137W-A 306 nt-0.13□□□□□ -2.43
CUE1P38428 YPL205CYPL205C 345 nt-0.13□□□□□ -2.43
CUE1P38428 YEL073CYEL073C 324 nt-0.14□□□□□ -2.43
CUE1P38428 YIL115W-AYIL115W-A 372 nt-0.14□□□□□ -2.43
CUE1P38428 YOR121CYOR121C 306 nt-0.14□□□□□ -2.43
CUE1P38428 YLR041WYLR041W 321 nt-0.15□□□□□ -2.43
CUE1P38428 YOR161W-AYOR161W-A 81 nt-0.15□□□□□ -2.43
CUE1P38428 YBR285WYBR285W 435 nt-0.15□□□□□ -2.43
CUE1P38428 MYO1YHR023W 5787 nt-0.15□□□□□ -2.43
CUE1P38428 YLR232WYLR232W 348 nt-0.16□□□□□ -2.44
CUE1P38428 YEL020C-BYEL020C-B 198 nt-0.17□□□□□ -2.44
CUE1P38428 RPS27BYHR021C 249 nt-0.18□□□□□ -2.44
CUE1P38428 TFB5YDR079C-A 219 nt-0.19□□□□□ -2.44
CUE1P38428 AGA2YGL032C 264 nt-0.2□□□□□ -2.44
CUE1P38428 tW(UCA)QtW(UCA)Q 74 nt-0.2□□□□□ -2.44
CUE1P38428 YGL123C-AYGL123C-A 231 nt-0.21□□□□□ -2.44
CUE1P38428 YMR001C-AYMR001C-A 231 nt-0.21□□□□□ -2.44
CUE1P38428 SNU13YEL026W 381 nt-0.22□□□□□ -2.44
CUE1P38428 BLI1YKL061W 342 nt-0.23□□□□□ -2.45
CUE1P38428 YNL324WYNL324W 396 nt-0.23□□□□□ -2.45
CUE1P38428 YDR048CYDR048C 315 nt-0.24□□□□□ -2.45
CUE1P38428 YFL063WYFL063W 456 nt-0.24□□□□□ -2.45
CUE1P38428 CSE2YNR010W 450 nt-0.24□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms