Protein–RNA interactions for Protein: P33749

MSN4, Zinc finger protein MSN4, yeastyeast

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSN4P33749 YNL211CYNL211C 261 nt0.13□□□□□ -2.39
MSN4P33749 YOR053WYOR053W 342 nt0.13□□□□□ -2.39
MSN4P33749 YLR456WYLR456W 615 nt0.11□□□□□ -2.39
MSN4P33749 PCF11YDR228C 1881 nt0.1□□□□□ -2.39
MSN4P33749 YLR101CYLR101C 396 nt0.09□□□□□ -2.4
MSN4P33749 YOR011W-AYOR011W-A 207 nt0.09□□□□□ -2.4
MSN4P33749 YOL013W-BYOL013W-B 291 nt0.08□□□□□ -2.4
MSN4P33749 YDR426CYDR426C 378 nt0.07□□□□□ -2.4
MSN4P33749 YMR321CYMR321C 318 nt0.07□□□□□ -2.4
MSN4P33749 THO2YNL139C 4794 nt0.07□□□□□ -2.4
MSN4P33749 COX12YLR038C 252 nt0.06□□□□□ -2.4
MSN4P33749 PCC1YKR095W-A 267 nt0.05□□□□□ -2.4
MSN4P33749 RCO1YMR075W 2055 nt0.05□□□□□ -2.4
MSN4P33749 YDR371C-AYDR371C-A 105 nt0.04□□□□□ -2.4
MSN4P33749 YLR334CYLR334C 381 nt0.04□□□□□ -2.4
MSN4P33749 ORC3YLL004W 1851 nt0.03□□□□□ -2.4
MSN4P33749 YER078W-AYER078W-A 165 nt0.03□□□□□ -2.4
MSN4P33749 YPL225WYPL225W 441 nt0.03□□□□□ -2.4
MSN4P33749 snR190snR190 190 nt0.03□□□□□ -2.4
MSN4P33749 RPS26AYGL189C 360 nt0.02□□□□□ -2.41
MSN4P33749 YMR307C-AYMR307C-A 195 nt0.02□□□□□ -2.41
MSN4P33749 YOR345CYOR345C 351 nt0.02□□□□□ -2.41
MSN4P33749 TAR1YLR154W-C 375 nt0.01□□□□□ -2.41
MSN4P33749 LEE1YPL054W 906 nt0.01□□□□□ -2.41
MSN4P33749 YPL068CYPL068C 882 nt0.01□□□□□ -2.41
MSN4P33749 YEL050W-AYEL050W-A 192 nt0□□□□□ -2.41
MSN4P33749 NNF2YGR089W 2811 nt0□□□□□ -2.41
MSN4P33749 YNL303WYNL303W 348 nt0□□□□□ -2.41
MSN4P33749 YOR186C-AYOR186C-A 210 nt0□□□□□ -2.41
MSN4P33749 YJL120WYJL120W 324 nt-0.01□□□□□ -2.41
MSN4P33749 snR41snR41 95 nt-0.01□□□□□ -2.41
MSN4P33749 RPS25BYLR333C 327 nt-0.02□□□□□ -2.41
MSN4P33749 TOM22YNL131W 459 nt-0.02□□□□□ -2.41
MSN4P33749 SGF11YPL047W 300 nt-0.02□□□□□ -2.41
MSN4P33749 COG8YML071C 1824 nt-0.03□□□□□ -2.42
MSN4P33749 YDL185C-AYDL185C-A 228 nt-0.04□□□□□ -2.42
MSN4P33749 YNL146WYNL146W 303 nt-0.04□□□□□ -2.42
MSN4P33749 NIP1YMR309C 2439 nt-0.04□□□□□ -2.42
MSN4P33749 VPS20YMR077C 666 nt-0.05□□□□□ -2.42
MSN4P33749 YCR018C-AYCR018C-A 255 nt-0.06□□□□□ -2.42
MSN4P33749 tN(GUU)QtN(GUU)Q 71 nt-0.06□□□□□ -2.42
MSN4P33749 BUL2YML111W 2763 nt-0.06□□□□□ -2.42
MSN4P33749 COY1YKL179C 2040 nt-0.08□□□□□ -2.42
MSN4P33749 YDL158CYDL158C 309 nt-0.08□□□□□ -2.42
MSN4P33749 SSS1YDR086C 243 nt-0.08□□□□□ -2.42
MSN4P33749 snR45snR45 172 nt-0.08□□□□□ -2.42
MSN4P33749 RPL35AYDL191W 363 nt-0.09□□□□□ -2.42
MSN4P33749 SOV1YMR066W 2697 nt-0.1□□□□□ -2.42
MSN4P33749 ULI1YFR026C 510 nt-0.1□□□□□ -2.43
MSN4P33749 YHR007C-AYHR007C-A 216 nt-0.1□□□□□ -2.43
MSN4P33749 YLR232WYLR232W 348 nt-0.1□□□□□ -2.43
MSN4P33749 YCR022CYCR022C 345 nt-0.12□□□□□ -2.43
MSN4P33749 YHR138CYHR138C 345 nt-0.13□□□□□ -2.43
MSN4P33749 YKU70YMR284W 1809 nt-0.13□□□□□ -2.43
MSN4P33749 YPR092WYPR092W 306 nt-0.15□□□□□ -2.43
MSN4P33749 YHR131W-AYHR131W-A 246 nt-0.16□□□□□ -2.44
MSN4P33749 YLR282CYLR282C 342 nt-0.17□□□□□ -2.44
MSN4P33749 ATP19YOL077W-A 207 nt-0.17□□□□□ -2.44
MSN4P33749 YEL073CYEL073C 324 nt-0.18□□□□□ -2.44
MSN4P33749 YLL006W-AYLL006W-A 177 nt-0.18□□□□□ -2.44
MSN4P33749 YAR053WYAR053W 297 nt-0.18□□□□□ -2.44
MSN4P33749 YLR434CYLR434C 384 nt-0.18□□□□□ -2.44
MSN4P33749 YKL136WYKL136W 399 nt-0.19□□□□□ -2.44
MSN4P33749 snR189snR189 189 nt-0.2□□□□□ -2.44
MSN4P33749 YAR029WYAR029W 225 nt-0.21□□□□□ -2.44
MSN4P33749 CSN9YDR179C 489 nt-0.22□□□□□ -2.44
MSN4P33749 YJL026C-AYJL026C-A 222 nt-0.22□□□□□ -2.44
MSN4P33749 YDR210WYDR210W 228 nt-0.23□□□□□ -2.45
MSN4P33749 YDR354C-AYDR354C-A 144 nt-0.23□□□□□ -2.45
MSN4P33749 YKL063CYKL063C 504 nt-0.23□□□□□ -2.45
MSN4P33749 YLR406C-AYLR406C-A 150 nt-0.23□□□□□ -2.45
MSN4P33749 snR8snR8 190 nt-0.24□□□□□ -2.45
MSN4P33749 PRP39YML046W 1890 nt-0.24□□□□□ -2.45
MSN4P33749 TFB5YDR079C-A 219 nt-0.25□□□□□ -2.45
MSN4P33749 YLR041WYLR041W 321 nt-0.26□□□□□ -2.45
MSN4P33749 snR128snR128 126 nt-0.26□□□□□ -2.45
MSN4P33749 YOR161W-AYOR161W-A 81 nt-0.28□□□□□ -2.45
MSN4P33749 PRM3YPL192C 402 nt-0.28□□□□□ -2.45
MSN4P33749 YEL020C-BYEL020C-B 198 nt-0.29□□□□□ -2.46
MSN4P33749 YJL007CYJL007C 315 nt-0.29□□□□□ -2.46
MSN4P33749 HTB2YBL002W 396 nt-0.29□□□□□ -2.46
MSN4P33749 YGR164WYGR164W 336 nt-0.3□□□□□ -2.46
MSN4P33749 YKL100W-AYKL100W-A 90 nt-0.3□□□□□ -2.46
MSN4P33749 YLR202CYLR202C 327 nt-0.32□□□□□ -2.46
MSN4P33749 SNU13YEL026W 381 nt-0.33□□□□□ -2.46
MSN4P33749 YGL123C-AYGL123C-A 231 nt-0.33□□□□□ -2.46
MSN4P33749 SBH2YER019C-A 267 nt-0.34□□□□□ -2.46
MSN4P33749 RPS27BYHR021C 249 nt-0.34□□□□□ -2.46
MSN4P33749 YAL016C-BYAL016C-B 186 nt-0.34□□□□□ -2.46
MSN4P33749 BLI1YKL061W 342 nt-0.35□□□□□ -2.47
MSN4P33749 CSE2YNR010W 450 nt-0.35□□□□□ -2.47
MSN4P33749 YBR072C-AYBR072C-A 162 nt-0.35□□□□□ -2.47
MSN4P33749 CSE1YGL238W 2883 nt-0.35□□□□□ -2.47
MSN4P33749 UTP8YGR128C 2142 nt-0.35□□□□□ -2.47
MSN4P33749 RAD61YDR014W 1944 nt-0.36□□□□□ -2.47
MSN4P33749 YDR366CYDR366C 399 nt-0.36□□□□□ -2.47
MSN4P33749 YOR121CYOR121C 306 nt-0.36□□□□□ -2.47
MSN4P33749 YPL205CYPL205C 345 nt-0.36□□□□□ -2.47
MSN4P33749 YBR099CYBR099C 384 nt-0.38□□□□□ -2.47
MSN4P33749 YFL063WYFL063W 456 nt-0.39□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms