Protein–RNA interactions for Protein: P32319

PEP1, Vacuolar protein sorting/targeting protein VPS10, yeastyeast

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP1P32319 snR49snR49 165 nt-2.59□□□□□ -2.82
PEP1P32319 RSM18YER050C 417 nt-2.61□□□□□ -2.83
PEP1P32319 YCR018C-AYCR018C-A 255 nt-2.62□□□□□ -2.83
PEP1P32319 SPC24YMR117C 642 nt-2.62□□□□□ -2.83
PEP1P32319 YPL068CYPL068C 882 nt-2.62□□□□□ -2.83
PEP1P32319 PMP2YEL017C-A 132 nt-2.63□□□□□ -2.83
PEP1P32319 YGR228WYGR228W 345 nt-2.63□□□□□ -2.83
PEP1P32319 YPR092WYPR092W 306 nt-2.66□□□□□ -2.83
PEP1P32319 Q0142Q0142 177 nt-2.66□□□□□ -2.84
PEP1P32319 YJL086CYJL086C 369 nt-2.66□□□□□ -2.84
PEP1P32319 YDR290WYDR290W 330 nt-2.67□□□□□ -2.84
PEP1P32319 BER1YLR412W 825 nt-2.68□□□□□ -2.84
PEP1P32319 YBR072C-AYBR072C-A 162 nt-2.69□□□□□ -2.84
PEP1P32319 snR5snR5 204 nt-2.7□□□□□ -2.84
PEP1P32319 snR189snR189 189 nt-2.7□□□□□ -2.84
PEP1P32319 YOR366WYOR366W 354 nt-2.71□□□□□ -2.84
PEP1P32319 tT(UGU)Q1tT(UGU)Q1 76 nt-2.72□□□□□ -2.84
PEP1P32319 RUF20RUF20 443 nt-2.72□□□□□ -2.84
PEP1P32319 COX7YMR256C 183 nt-2.73□□□□□ -2.85
PEP1P32319 YOR170WYOR170W 306 nt-2.74□□□□□ -2.85
PEP1P32319 YLR264C-AYLR264C-A 117 nt-2.78□□□□□ -2.85
PEP1P32319 PET20YPL159C 762 nt-2.78□□□□□ -2.85
PEP1P32319 HUR1YGL168W 333 nt-2.78□□□□□ -2.86
PEP1P32319 CUP1-1YHR053C 186 nt-2.78□□□□□ -2.86
PEP1P32319 CUP1-2YHR055C 186 nt-2.78□□□□□ -2.86
PEP1P32319 YJR140W-AYJR140W-A 150 nt-2.78□□□□□ -2.86
PEP1P32319 snR24snR24 89 nt-2.78□□□□□ -2.86
PEP1P32319 YNL162W-AYNL162W-A 219 nt-2.79□□□□□ -2.86
PEP1P32319 SCEIQ0160 708 nt-2.8□□□□□ -2.86
PEP1P32319 YER135CYER135C 393 nt-2.83□□□□□ -2.86
PEP1P32319 VPS20YMR077C 666 nt-2.83□□□□□ -2.86
PEP1P32319 YOR192C-CYOR192C-C 237 nt-2.83□□□□□ -2.86
PEP1P32319 YPR016W-AYPR016W-A 261 nt-2.87□□□□□ -2.87
PEP1P32319 RPL22BYFL034C-A 369 nt-2.88□□□□□ -2.87
PEP1P32319 YOR011W-AYOR011W-A 207 nt-2.88□□□□□ -2.87
PEP1P32319 IRC16YPR038W 360 nt-2.88□□□□□ -2.87
PEP1P32319 BNS1YGR230W 414 nt-2.89□□□□□ -2.87
PEP1P32319 YBL107W-AYBL107W-A 105 nt-2.89□□□□□ -2.87
PEP1P32319 snR72snR72 98 nt-2.9□□□□□ -2.87
PEP1P32319 SGF11YPL047W 300 nt-2.9□□□□□ -2.87
PEP1P32319 CBS1YDL069C 690 nt-2.91□□□□□ -2.87
PEP1P32319 YGL015CYGL015C 393 nt-2.91□□□□□ -2.87
PEP1P32319 THG1YGR024C 714 nt-2.91□□□□□ -2.87
PEP1P32319 YPR010C-AYPR010C-A 219 nt-2.92□□□□□ -2.88
PEP1P32319 snR74snR74 88 nt-2.93□□□□□ -2.88
PEP1P32319 SRB7YDR308C 423 nt-2.94□□□□□ -2.88
PEP1P32319 DFG10YIL049W 762 nt-2.94□□□□□ -2.88
PEP1P32319 CWC23YGL128C 852 nt-2.95□□□□□ -2.88
PEP1P32319 MND1YGL183C 660 nt-2.95□□□□□ -2.88
PEP1P32319 YKL202WYKL202W 582 nt-2.96□□□□□ -2.88
PEP1P32319 VPS63YLR261C 327 nt-2.96□□□□□ -2.88
PEP1P32319 RDS3YPR094W 324 nt-2.96□□□□□ -2.88
PEP1P32319 YDR366CYDR366C 399 nt-2.97□□□□□ -2.89
PEP1P32319 YGL052WYGL052W 306 nt-3.01□□□□□ -2.89
PEP1P32319 ACF4YJR083C 930 nt-3.04□□□□□ -2.9
PEP1P32319 snR81snR81 201 nt-3.05□□□□□ -2.9
PEP1P32319 CDC65tQ(CUG)M 72 nt-3.05□□□□□ -2.9
PEP1P32319 EAF6YJR082C 342 nt-3.06□□□□□ -2.9
PEP1P32319 YOL106WYOL106W 354 nt-3.06□□□□□ -2.9
PEP1P32319 POP7YBR167C 423 nt-3.08□□□□□ -2.9
PEP1P32319 LSM4YER112W 564 nt-3.08□□□□□ -2.9
PEP1P32319 YKL063CYKL063C 504 nt-3.09□□□□□ -2.9
PEP1P32319 YNL058CYNL058C 951 nt-3.09□□□□□ -2.9
PEP1P32319 snR51snR51 107 nt-3.09□□□□□ -2.9
PEP1P32319 SDH6YDR379C-A 240 nt-3.1□□□□□ -2.91
PEP1P32319 YER053C-AYER053C-A 114 nt-3.1□□□□□ -2.91
PEP1P32319 YER188C-AYER188C-A 300 nt-3.11□□□□□ -2.91
PEP1P32319 snR59snR59 78 nt-3.12□□□□□ -2.91
PEP1P32319 YGL239CYGL239C 315 nt-3.12□□□□□ -2.91
PEP1P32319 AIM29YKR074W 468 nt-3.14□□□□□ -2.91
PEP1P32319 YPT6YLR262C 648 nt-3.14□□□□□ -2.91
PEP1P32319 YHR125WYHR125W 306 nt-3.15□□□□□ -2.91
PEP1P32319 JLP2YMR132C 627 nt-3.16□□□□□ -2.91
PEP1P32319 ZEO1YOL109W 342 nt-3.16□□□□□ -2.91
PEP1P32319 YPL229WYPL229W 621 nt-3.17□□□□□ -2.92
PEP1P32319 FYV7YLR068W 456 nt-3.19□□□□□ -2.92
PEP1P32319 HMLALPHA2YCL067C 633 nt-3.2□□□□□ -2.92
PEP1P32319 MATALPHA2YCR039C 633 nt-3.2□□□□□ -2.92
PEP1P32319 HMRA2YCR096C 360 nt-3.2□□□□□ -2.92
PEP1P32319 YMR304C-AYMR304C-A 351 nt-3.2□□□□□ -2.92
PEP1P32319 YGR025WYGR025W 303 nt-3.21□□□□□ -2.92
PEP1P32319 YOR293C-AYOR293C-A 150 nt-3.22□□□□□ -2.93
PEP1P32319 YOR364WYOR364W 369 nt-3.22□□□□□ -2.93
PEP1P32319 YFR009W-AYFR009W-A 258 nt-3.26□□□□□ -2.93
PEP1P32319 snR77snR77 88 nt-3.28□□□□□ -2.93
PEP1P32319 YGR240C-AYGR240C-A 201 nt-3.29□□□□□ -2.94
PEP1P32319 YOR121CYOR121C 306 nt-3.29□□□□□ -2.94
PEP1P32319 YBR285WYBR285W 435 nt-3.29□□□□□ -2.94
PEP1P32319 YKL100W-AYKL100W-A 90 nt-3.31□□□□□ -2.94
PEP1P32319 YJR087WYJR087W 351 nt-3.33□□□□□ -2.94
PEP1P32319 YAR029WYAR029W 225 nt-3.34□□□□□ -2.94
PEP1P32319 CSE2YNR010W 450 nt-3.34□□□□□ -2.94
PEP1P32319 ILM1YJR118C 612 nt-3.34□□□□□ -2.94
PEP1P32319 YKL044WYKL044W 321 nt-3.34□□□□□ -2.94
PEP1P32319 snR39BsnR39B 96 nt-3.36□□□□□ -2.95
PEP1P32319 YDR354C-AYDR354C-A 144 nt-3.39□□□□□ -2.95
PEP1P32319 YCR001WYCR001W 315 nt-3.41□□□□□ -2.96
PEP1P32319 YGL230CYGL230C 444 nt-3.42□□□□□ -2.96
PEP1P32319 YLR334CYLR334C 381 nt-3.42□□□□□ -2.96
PEP1P32319 YLR456WYLR456W 615 nt-3.42□□□□□ -2.96
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms