Protein–RNA interactions for Protein: P20434

RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1, yeastyeast

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB5P20434 IES4YOR189W 351 nt1.02□□□□□ -2.25
RPB5P20434 MCM10YIL150C 1716 nt1.01□□□□□ -2.25
RPB5P20434 TTI1YKL033W 3117 nt1.01□□□□□ -2.25
RPB5P20434 NUP157YER105C 4176 nt1.01□□□□□ -2.25
RPB5P20434 YCR022CYCR022C 345 nt1.01□□□□□ -2.25
RPB5P20434 YGL052WYGL052W 306 nt1.01□□□□□ -2.25
RPB5P20434 YOR282WYOR282W 321 nt1.01□□□□□ -2.25
RPB5P20434 SMC1YFL008W 3678 nt1□□□□□ -2.25
RPB5P20434 snR74snR74 88 nt1□□□□□ -2.25
RPB5P20434 YJL197C-AYJL197C-A 282 nt1□□□□□ -2.25
RPB5P20434 YBR200W-AYBR200W-A 165 nt1□□□□□ -2.25
RPB5P20434 APL1YJR005W 2103 nt1□□□□□ -2.25
RPB5P20434 NST1YNL091W 3723 nt0.99□□□□□ -2.25
RPB5P20434 YGL041CYGL041C 204 nt0.99□□□□□ -2.25
RPB5P20434 OLI1Q0130 231 nt0.99□□□□□ -2.25
RPB5P20434 YMR172C-AYMR172C-A 384 nt0.99□□□□□ -2.25
RPB5P20434 YDR354C-AYDR354C-A 144 nt0.98□□□□□ -2.25
RPB5P20434 YOR008C-AYOR008C-A 225 nt0.98□□□□□ -2.25
RPB5P20434 YPR092WYPR092W 306 nt0.98□□□□□ -2.25
RPB5P20434 NUP145YGL092W 3954 nt0.97□□□□□ -2.25
RPB5P20434 YFR012W-AYFR012W-A 87 nt0.96□□□□□ -2.26
RPB5P20434 YNL211CYNL211C 261 nt0.96□□□□□ -2.26
RPB5P20434 MSN5YDR335W 3675 nt0.96□□□□□ -2.26
RPB5P20434 PAN2YGL094C 3348 nt0.95□□□□□ -2.26
RPB5P20434 MYO1YHR023W 5787 nt0.95□□□□□ -2.26
RPB5P20434 YLL019W-AYLL019W-A 93 nt0.95□□□□□ -2.26
RPB5P20434 snR49snR49 165 nt0.94□□□□□ -2.26
RPB5P20434 ROM2YLR371W 4071 nt0.93□□□□□ -2.26
RPB5P20434 snR80snR80 171 nt0.92□□□□□ -2.26
RPB5P20434 CMC4YMR194C-B 222 nt0.92□□□□□ -2.26
RPB5P20434 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
RPB5P20434 YDL196WYDL196W 330 nt0.91□□□□□ -2.26
RPB5P20434 EMT1tM(CAU)D 73 nt0.91□□□□□ -2.26
RPB5P20434 EMT5tM(CAU)J1 73 nt0.91□□□□□ -2.26
RPB5P20434 EMT3tM(CAU)J2 73 nt0.91□□□□□ -2.26
RPB5P20434 EMT4tM(CAU)M 73 nt0.91□□□□□ -2.26
RPB5P20434 EMT2tM(CAU)O2 73 nt0.91□□□□□ -2.26
RPB5P20434 YHR063W-AYHR063W-A 336 nt0.91□□□□□ -2.26
RPB5P20434 BEM2YER155C 6504 nt0.9□□□□□ -2.26
RPB5P20434 NPR2YEL062W 1848 nt0.9□□□□□ -2.27
RPB5P20434 YDL185C-AYDL185C-A 228 nt0.9□□□□□ -2.27
RPB5P20434 YMR307C-AYMR307C-A 195 nt0.89□□□□□ -2.27
RPB5P20434 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
RPB5P20434 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
RPB5P20434 NOP9YJL010C 2001 nt0.88□□□□□ -2.27
RPB5P20434 tF(GAA)QtF(GAA)Q 75 nt0.88□□□□□ -2.27
RPB5P20434 YJL026C-AYJL026C-A 222 nt0.88□□□□□ -2.27
RPB5P20434 ABF2YMR072W 552 nt0.88□□□□□ -2.27
RPB5P20434 YOR072W-BYOR072W-B 162 nt0.88□□□□□ -2.27
RPB5P20434 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
RPB5P20434 YCS4YLR272C 3531 nt0.87□□□□□ -2.27
RPB5P20434 SEC3YER008C 4011 nt0.87□□□□□ -2.27
RPB5P20434 snR55snR55 98 nt0.87□□□□□ -2.27
RPB5P20434 snR8snR8 190 nt0.87□□□□□ -2.27
RPB5P20434 YGL188C-AYGL188C-A 141 nt0.87□□□□□ -2.27
RPB5P20434 YPL044CYPL044C 549 nt0.87□□□□□ -2.27
RPB5P20434 YOL155W-AYOL155W-A 135 nt0.86□□□□□ -2.27
RPB5P20434 ASE1YOR058C 2658 nt0.86□□□□□ -2.27
RPB5P20434 YDR366CYDR366C 399 nt0.85□□□□□ -2.27
RPB5P20434 YAL067W-AYAL067W-A 228 nt0.85□□□□□ -2.27
RPB5P20434 YOR345CYOR345C 351 nt0.85□□□□□ -2.27
RPB5P20434 PAA1YDR071C 576 nt0.84□□□□□ -2.27
RPB5P20434 YIR030W-AYIR030W-A 384 nt0.83□□□□□ -2.28
RPB5P20434 YOR302WYOR302W 78 nt0.83□□□□□ -2.28
RPB5P20434 PAU24YBR301W 363 nt0.83□□□□□ -2.28
RPB5P20434 COY1YKL179C 2040 nt0.82□□□□□ -2.28
RPB5P20434 YCR018C-AYCR018C-A 255 nt0.82□□□□□ -2.28
RPB5P20434 YBR182C-AYBR182C-A 195 nt0.82□□□□□ -2.28
RPB5P20434 ISD11YER048W-A 285 nt0.81□□□□□ -2.28
RPB5P20434 YIL134C-AYIL134C-A 204 nt0.81□□□□□ -2.28
RPB5P20434 YOR161W-AYOR161W-A 81 nt0.81□□□□□ -2.28
RPB5P20434 RPS30BYOR182C 192 nt0.81□□□□□ -2.28
RPB5P20434 YBR131C-AYBR131C-A 90 nt0.81□□□□□ -2.28
RPB5P20434 UBP3YER151C 2739 nt0.8□□□□□ -2.28
RPB5P20434 YKU70YMR284W 1809 nt0.8□□□□□ -2.28
RPB5P20434 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
RPB5P20434 PMP1YCR024C-A 123 nt0.79□□□□□ -2.28
RPB5P20434 RPL26BYGR034W 384 nt0.79□□□□□ -2.28
RPB5P20434 PAM16YJL104W 450 nt0.79□□□□□ -2.28
RPB5P20434 KAP120YPL125W 3099 nt0.78□□□□□ -2.29
RPB5P20434 YCR038W-AYCR038W-A 126 nt0.77□□□□□ -2.29
RPB5P20434 snR190snR190 190 nt0.77□□□□□ -2.29
RPB5P20434 STF2YGR008C 255 nt0.76□□□□□ -2.29
RPB5P20434 COX12YLR038C 252 nt0.76□□□□□ -2.29
RPB5P20434 YLR282CYLR282C 342 nt0.76□□□□□ -2.29
RPB5P20434 YGL123C-AYGL123C-A 231 nt0.75□□□□□ -2.29
RPB5P20434 YMR158W-BYMR158W-B 321 nt0.75□□□□□ -2.29
RPB5P20434 YER053C-AYER053C-A 114 nt0.74□□□□□ -2.29
RPB5P20434 ULI1YFR026C 510 nt0.73□□□□□ -2.29
RPB5P20434 YIL142C-AYIL142C-A 333 nt0.73□□□□□ -2.29
RPB5P20434 tN(GUU)QtN(GUU)Q 71 nt0.72□□□□□ -2.29
RPB5P20434 HUG1YML058W-A 207 nt0.72□□□□□ -2.29
RPB5P20434 YNL097C-BYNL097C-B 123 nt0.72□□□□□ -2.29
RPB5P20434 CHS6YJL099W 2241 nt0.72□□□□□ -2.29
RPB5P20434 YDL073WYDL073W 2955 nt0.71□□□□□ -2.3
RPB5P20434 APQ12YIL040W 417 nt0.71□□□□□ -2.3
RPB5P20434 BLI1YKL061W 342 nt0.71□□□□□ -2.3
RPB5P20434 YPR160W-AYPR160W-A 81 nt0.71□□□□□ -2.3
RPB5P20434 YML002WYML002W 2214 nt0.7□□□□□ -2.3
RPB5P20434 COX5BYIL111W 456 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 100.3 ms