Protein–RNA interactions for Protein: P15315

CUP2, Transcriptional activator protein CUP2, yeastyeast

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP2P15315 VIK1YPL253C 1944 nt0.81□□□□□ -2.28
CUP2P15315 YHL042WYHL042W 453 nt0.81□□□□□ -2.28
CUP2P15315 SIP4YJL089W 2490 nt0.81□□□□□ -2.28
CUP2P15315 NUP157YER105C 4176 nt0.8□□□□□ -2.28
CUP2P15315 OLI1Q0130 231 nt0.8□□□□□ -2.28
CUP2P15315 SGF11YPL047W 300 nt0.8□□□□□ -2.28
CUP2P15315 SMC1YFL008W 3678 nt0.79□□□□□ -2.28
CUP2P15315 RPS27BYHR021C 249 nt0.79□□□□□ -2.28
CUP2P15315 RPL39YJL189W 156 nt0.79□□□□□ -2.28
CUP2P15315 YPR010C-AYPR010C-A 219 nt0.79□□□□□ -2.28
CUP2P15315 YDL196WYDL196W 330 nt0.78□□□□□ -2.28
CUP2P15315 YMR031W-AYMR031W-A 327 nt0.78□□□□□ -2.28
CUP2P15315 YMR321CYMR321C 318 nt0.78□□□□□ -2.28
CUP2P15315 RKR1YMR247C 4689 nt0.78□□□□□ -2.29
CUP2P15315 ALG13YGL047W 609 nt0.77□□□□□ -2.29
CUP2P15315 CSE2YNR010W 450 nt0.77□□□□□ -2.29
CUP2P15315 YOR015WYOR015W 360 nt0.77□□□□□ -2.29
CUP2P15315 RAD61YDR014W 1944 nt0.76□□□□□ -2.29
CUP2P15315 YNL211CYNL211C 261 nt0.76□□□□□ -2.29
CUP2P15315 YOR218CYOR218C 420 nt0.76□□□□□ -2.29
CUP2P15315 YFR012W-AYFR012W-A 87 nt0.75□□□□□ -2.29
CUP2P15315 BFR2YDR299W 1605 nt0.75□□□□□ -2.29
CUP2P15315 YDR354C-AYDR354C-A 144 nt0.74□□□□□ -2.29
CUP2P15315 YGR069WYGR069W 336 nt0.74□□□□□ -2.29
CUP2P15315 CMC4YMR194C-B 222 nt0.74□□□□□ -2.29
CUP2P15315 YNL028WYNL028W 318 nt0.74□□□□□ -2.29
CUP2P15315 YNL146WYNL146W 303 nt0.74□□□□□ -2.29
CUP2P15315 RPS30BYOR182C 192 nt0.74□□□□□ -2.29
CUP2P15315 YNL277W-AYNL277W-A 189 nt0.73□□□□□ -2.29
CUP2P15315 IES4YOR189W 351 nt0.73□□□□□ -2.29
CUP2P15315 UTP20YBL004W 7482 nt0.72□□□□□ -2.29
CUP2P15315 NOP9YJL010C 2001 nt0.72□□□□□ -2.29
CUP2P15315 ASE1YOR058C 2658 nt0.71□□□□□ -2.29
CUP2P15315 YLR120W-AYLR120W-A 102 nt0.71□□□□□ -2.3
CUP2P15315 YPL044CYPL044C 549 nt0.71□□□□□ -2.3
CUP2P15315 MYO1YHR023W 5787 nt0.7□□□□□ -2.3
CUP2P15315 snR65snR65 100 nt0.7□□□□□ -2.3
CUP2P15315 ISD11YER048W-A 285 nt0.7□□□□□ -2.3
CUP2P15315 PAU24YBR301W 363 nt0.7□□□□□ -2.3
CUP2P15315 YDL185C-AYDL185C-A 228 nt0.69□□□□□ -2.3
CUP2P15315 YEL020C-BYEL020C-B 198 nt0.69□□□□□ -2.3
CUP2P15315 PAM16YJL104W 450 nt0.69□□□□□ -2.3
CUP2P15315 YLL019W-AYLL019W-A 93 nt0.69□□□□□ -2.3
CUP2P15315 YMR172C-AYMR172C-A 384 nt0.68□□□□□ -2.3
CUP2P15315 YOR231C-AYOR231C-A 201 nt0.68□□□□□ -2.3
CUP2P15315 PMP1YCR024C-A 123 nt0.67□□□□□ -2.3
CUP2P15315 snR74snR74 88 nt0.67□□□□□ -2.3
CUP2P15315 YGL052WYGL052W 306 nt0.67□□□□□ -2.3
CUP2P15315 YJL197C-AYJL197C-A 282 nt0.67□□□□□ -2.3
CUP2P15315 YOR282WYOR282W 321 nt0.67□□□□□ -2.3
CUP2P15315 YPR092WYPR092W 306 nt0.67□□□□□ -2.3
CUP2P15315 YDL073WYDL073W 2955 nt0.66□□□□□ -2.3
CUP2P15315 PAA1YDR071C 576 nt0.66□□□□□ -2.3
CUP2P15315 YJL026C-AYJL026C-A 222 nt0.66□□□□□ -2.3
CUP2P15315 PAU12YGR294W 363 nt0.65□□□□□ -2.31
CUP2P15315 YAL067W-AYAL067W-A 228 nt0.65□□□□□ -2.31
CUP2P15315 YOR008C-AYOR008C-A 225 nt0.65□□□□□ -2.31
CUP2P15315 SEC1YDR164C 2175 nt0.64□□□□□ -2.31
CUP2P15315 YIL142C-AYIL142C-A 333 nt0.64□□□□□ -2.31
CUP2P15315 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
CUP2P15315 YCR018C-AYCR018C-A 255 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)BtF(GAA)B 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)FtF(GAA)F 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)GtF(GAA)G 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)H1tF(GAA)H1 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)H2tF(GAA)H2 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)MtF(GAA)M 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)P1tF(GAA)P1 73 nt0.63□□□□□ -2.31
CUP2P15315 tF(GAA)P2tF(GAA)P2 73 nt0.63□□□□□ -2.31
CUP2P15315 RPL26BYGR034W 384 nt0.63□□□□□ -2.31
CUP2P15315 NPR2YEL062W 1848 nt0.62□□□□□ -2.31
CUP2P15315 YOR072W-BYOR072W-B 162 nt0.62□□□□□ -2.31
CUP2P15315 CHS6YJL099W 2241 nt0.61□□□□□ -2.31
CUP2P15315 PRP16YKR086W 3216 nt0.61□□□□□ -2.31
CUP2P15315 COY1YKL179C 2040 nt0.61□□□□□ -2.31
CUP2P15315 YPL152W-AYPL152W-A 99 nt0.61□□□□□ -2.31
CUP2P15315 snR190snR190 190 nt0.6□□□□□ -2.31
CUP2P15315 YER181CYER181C 324 nt0.59□□□□□ -2.31
CUP2P15315 YHR063W-AYHR063W-A 336 nt0.59□□□□□ -2.31
CUP2P15315 YOR161W-AYOR161W-A 81 nt0.59□□□□□ -2.31
CUP2P15315 YGL041CYGL041C 204 nt0.58□□□□□ -2.32
CUP2P15315 QCR9YGR183C 201 nt0.58□□□□□ -2.32
CUP2P15315 YLR282CYLR282C 342 nt0.58□□□□□ -2.32
CUP2P15315 YML002WYML002W 2214 nt0.58□□□□□ -2.32
CUP2P15315 YMR307C-AYMR307C-A 195 nt0.57□□□□□ -2.32
CUP2P15315 YPR160W-AYPR160W-A 81 nt0.57□□□□□ -2.32
CUP2P15315 snR49snR49 165 nt0.57□□□□□ -2.32
CUP2P15315 LTE1YAL024C 4308 nt0.57□□□□□ -2.32
CUP2P15315 YMR160WYMR160W 2451 nt0.56□□□□□ -2.32
CUP2P15315 FYV10YIL097W 1551 nt0.56□□□□□ -2.32
CUP2P15315 SEC8YPR055W 3198 nt0.55□□□□□ -2.32
CUP2P15315 tF(GAA)QtF(GAA)Q 75 nt0.55□□□□□ -2.32
CUP2P15315 ULI1YFR026C 510 nt0.55□□□□□ -2.32
CUP2P15315 YGL123C-AYGL123C-A 231 nt0.55□□□□□ -2.32
CUP2P15315 tN(GUU)QtN(GUU)Q 71 nt0.55□□□□□ -2.32
CUP2P15315 YIL134C-AYIL134C-A 204 nt0.55□□□□□ -2.32
CUP2P15315 YMR272W-AYMR272W-A 114 nt0.55□□□□□ -2.32
CUP2P15315 PRP5YBR237W 2550 nt0.55□□□□□ -2.32
CUP2P15315 COX5BYIL111W 456 nt0.54□□□□□ -2.32
CUP2P15315 YIR030W-AYIR030W-A 384 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 53.5 ms