Protein–RNA interactions for Protein: O13559

YRF1-4, Y' element ATP-dependent helicase protein 1 copy 4, yeastyeast

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4O13559 tT(AGU)CtT(AGU)C 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)DtT(AGU)D 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)HtT(AGU)H 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)I1tT(AGU)I1 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)I2tT(AGU)I2 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)JtT(AGU)J 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)N1tT(AGU)N1 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)N2tT(AGU)N2 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)O1tT(AGU)O1 73 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)O2tT(AGU)O2 73 nt0.98□□□□□ -2.25
YRF1-4O13559 CMC4YMR194C-B 222 nt0.98□□□□□ -2.25
YRF1-4O13559 YDR183C-AYDR183C-A 258 nt0.97□□□□□ -2.25
YRF1-4O13559 YOR011W-AYOR011W-A 207 nt0.97□□□□□ -2.25
YRF1-4O13559 GIM4YEL003W 336 nt0.96□□□□□ -2.26
YRF1-4O13559 OLI1Q0130 231 nt0.96□□□□□ -2.26
YRF1-4O13559 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
YRF1-4O13559 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
YRF1-4O13559 DBP6YNR038W 1890 nt0.96□□□□□ -2.26
YRF1-4O13559 ATP6Q0085 780 nt0.96□□□□□ -2.26
YRF1-4O13559 NOP9YJL010C 2001 nt0.95□□□□□ -2.26
YRF1-4O13559 IQG1YPL242C 4488 nt0.95□□□□□ -2.26
YRF1-4O13559 snR56snR56 88 nt0.95□□□□□ -2.26
YRF1-4O13559 HTL1YCR020W-B 237 nt0.95□□□□□ -2.26
YRF1-4O13559 TRS65YGR166W 1683 nt0.95□□□□□ -2.26
YRF1-4O13559 YHR175W-AYHR175W-A 150 nt0.95□□□□□ -2.26
YRF1-4O13559 YAF9YNL107W 681 nt0.95□□□□□ -2.26
YRF1-4O13559 PAA1YDR071C 576 nt0.94□□□□□ -2.26
YRF1-4O13559 SSS1YDR086C 243 nt0.94□□□□□ -2.26
YRF1-4O13559 FMP27YLR454W 7887 nt0.94□□□□□ -2.26
YRF1-4O13559 SPO21YOL091W 1830 nt0.93□□□□□ -2.26
YRF1-4O13559 ALG13YGL047W 609 nt0.93□□□□□ -2.26
YRF1-4O13559 YPL225WYPL225W 441 nt0.93□□□□□ -2.26
YRF1-4O13559 YPL044CYPL044C 549 nt0.92□□□□□ -2.26
YRF1-4O13559 MCM10YIL150C 1716 nt0.91□□□□□ -2.26
YRF1-4O13559 THO2YNL139C 4794 nt0.91□□□□□ -2.26
YRF1-4O13559 IES4YOR189W 351 nt0.91□□□□□ -2.26
YRF1-4O13559 PMP1YCR024C-A 123 nt0.9□□□□□ -2.27
YRF1-4O13559 YIL115W-AYIL115W-A 372 nt0.9□□□□□ -2.27
YRF1-4O13559 YOR218CYOR218C 420 nt0.9□□□□□ -2.27
YRF1-4O13559 BUL2YML111W 2763 nt0.88□□□□□ -2.27
YRF1-4O13559 BFR2YDR299W 1605 nt0.88□□□□□ -2.27
YRF1-4O13559 tR(ACG)Q2tR(ACG)Q2 74 nt0.87□□□□□ -2.27
YRF1-4O13559 RPS27BYHR021C 249 nt0.87□□□□□ -2.27
YRF1-4O13559 ECM12YHR021W-A 456 nt0.87□□□□□ -2.27
YRF1-4O13559 COG8YML071C 1824 nt0.87□□□□□ -2.27
YRF1-4O13559 YDR344CYDR344C 444 nt0.86□□□□□ -2.27
YRF1-4O13559 YFL063WYFL063W 456 nt0.86□□□□□ -2.27
YRF1-4O13559 RPL26BYGR034W 384 nt0.86□□□□□ -2.27
YRF1-4O13559 YKL118WYKL118W 312 nt0.86□□□□□ -2.27
YRF1-4O13559 snR36snR36 182 nt0.86□□□□□ -2.27
YRF1-4O13559 STE5YDR103W 2754 nt0.86□□□□□ -2.27
YRF1-4O13559 ASE1YOR058C 2658 nt0.86□□□□□ -2.27
YRF1-4O13559 YSP1YHR155W 3687 nt0.86□□□□□ -2.27
YRF1-4O13559 YGL149WYGL149W 306 nt0.85□□□□□ -2.27
YRF1-4O13559 YNL211CYNL211C 261 nt0.85□□□□□ -2.27
YRF1-4O13559 CSE2YNR010W 450 nt0.85□□□□□ -2.27
YRF1-4O13559 SEC1YDR164C 2175 nt0.85□□□□□ -2.27
YRF1-4O13559 TAH1YCR060W 336 nt0.84□□□□□ -2.27
YRF1-4O13559 VIK1YPL253C 1944 nt0.83□□□□□ -2.28
YRF1-4O13559 YIL032CYIL032C 357 nt0.83□□□□□ -2.28
YRF1-4O13559 RPL39YJL189W 156 nt0.83□□□□□ -2.28
YRF1-4O13559 AI1Q0050 2505 nt0.82□□□□□ -2.28
YRF1-4O13559 SGF11YPL047W 300 nt0.82□□□□□ -2.28
YRF1-4O13559 snR60snR60 104 nt0.81□□□□□ -2.28
YRF1-4O13559 SEC8YPR055W 3198 nt0.8□□□□□ -2.28
YRF1-4O13559 YFL032WYFL032W 321 nt0.8□□□□□ -2.28
YRF1-4O13559 YHR063W-AYHR063W-A 336 nt0.8□□□□□ -2.28
YRF1-4O13559 HAL9YOL089C 3093 nt0.79□□□□□ -2.28
YRF1-4O13559 NPR2YEL062W 1848 nt0.78□□□□□ -2.28
YRF1-4O13559 YAL067W-AYAL067W-A 228 nt0.78□□□□□ -2.28
YRF1-4O13559 YMR193C-AYMR193C-A 387 nt0.78□□□□□ -2.28
YRF1-4O13559 RKR1YMR247C 4689 nt0.77□□□□□ -2.29
YRF1-4O13559 CHS6YJL099W 2241 nt0.77□□□□□ -2.29
YRF1-4O13559 YKL136WYKL136W 399 nt0.77□□□□□ -2.29
YRF1-4O13559 YNL028WYNL028W 318 nt0.77□□□□□ -2.29
YRF1-4O13559 BEM3YPL115C 3387 nt0.76□□□□□ -2.29
YRF1-4O13559 YDR413CYDR413C 576 nt0.76□□□□□ -2.29
YRF1-4O13559 YFR012W-AYFR012W-A 87 nt0.75□□□□□ -2.29
YRF1-4O13559 YLR399W-AYLR399W-A 105 nt0.75□□□□□ -2.29
YRF1-4O13559 YER097WYER097W 330 nt0.74□□□□□ -2.29
YRF1-4O13559 YMR307C-AYMR307C-A 195 nt0.74□□□□□ -2.29
YRF1-4O13559 YDR354C-AYDR354C-A 144 nt0.73□□□□□ -2.29
YRF1-4O13559 YPR160W-AYPR160W-A 81 nt0.73□□□□□ -2.29
YRF1-4O13559 FYV10YIL097W 1551 nt0.73□□□□□ -2.29
YRF1-4O13559 YJL026C-AYJL026C-A 222 nt0.72□□□□□ -2.29
YRF1-4O13559 YMR272W-AYMR272W-A 114 nt0.72□□□□□ -2.29
YRF1-4O13559 COX5BYIL111W 456 nt0.71□□□□□ -2.3
YRF1-4O13559 snR190snR190 190 nt0.71□□□□□ -2.3
YRF1-4O13559 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
YRF1-4O13559 YCR018C-AYCR018C-A 255 nt0.7□□□□□ -2.3
YRF1-4O13559 YDR524W-CYDR524W-C 90 nt0.7□□□□□ -2.3
YRF1-4O13559 YMR031W-AYMR031W-A 327 nt0.7□□□□□ -2.3
YRF1-4O13559 YJL197C-AYJL197C-A 282 nt0.7□□□□□ -2.3
YRF1-4O13559 YDL185C-AYDL185C-A 228 nt0.69□□□□□ -2.3
YRF1-4O13559 YEL020C-BYEL020C-B 198 nt0.69□□□□□ -2.3
YRF1-4O13559 YML002WYML002W 2214 nt0.69□□□□□ -2.3
YRF1-4O13559 PRP5YBR237W 2550 nt0.68□□□□□ -2.3
YRF1-4O13559 YLR120W-AYLR120W-A 102 nt0.65□□□□□ -2.31
YRF1-4O13559 YOR008C-AYOR008C-A 225 nt0.65□□□□□ -2.31
YRF1-4O13559 YER078W-AYER078W-A 165 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 36.6 ms