Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YIL115W-AYIL115W-A 372 nt1.09□□□□□ -2.23
TY1B-AO13527 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
TY1B-AO13527 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
TY1B-AO13527 WAR1YML076C 2835 nt1.08□□□□□ -2.24
TY1B-AO13527 CDC39YCR093W 6327 nt1.07□□□□□ -2.24
TY1B-AO13527 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
TY1B-AO13527 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
TY1B-AO13527 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
TY1B-AO13527 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
TY1B-AO13527 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
TY1B-AO13527 PAU12YGR294W 363 nt1.07□□□□□ -2.24
TY1B-AO13527 PAU24YBR301W 363 nt1.07□□□□□ -2.24
TY1B-AO13527 RAD61YDR014W 1944 nt1.06□□□□□ -2.24
TY1B-AO13527 YGL041CYGL041C 204 nt1.05□□□□□ -2.24
TY1B-AO13527 YPL152W-AYPL152W-A 99 nt1.05□□□□□ -2.24
TY1B-AO13527 YBR206WYBR206W 324 nt1.05□□□□□ -2.24
TY1B-AO13527 YEL020C-BYEL020C-B 198 nt1.04□□□□□ -2.24
TY1B-AO13527 YIL142C-AYIL142C-A 333 nt1.03□□□□□ -2.24
TY1B-AO13527 RPS25BYLR333C 327 nt1.03□□□□□ -2.24
TY1B-AO13527 YMR321CYMR321C 318 nt1.03□□□□□ -2.24
TY1B-AO13527 YOR015WYOR015W 360 nt1.03□□□□□ -2.24
TY1B-AO13527 snR8snR8 190 nt1.02□□□□□ -2.25
TY1B-AO13527 YHR063W-AYHR063W-A 336 nt1.02□□□□□ -2.25
TY1B-AO13527 COG8YML071C 1824 nt1.02□□□□□ -2.25
TY1B-AO13527 VIK1YPL253C 1944 nt1.01□□□□□ -2.25
TY1B-AO13527 snR80snR80 171 nt1.01□□□□□ -2.25
TY1B-AO13527 YJL120WYJL120W 324 nt1.01□□□□□ -2.25
TY1B-AO13527 YMR158W-BYMR158W-B 321 nt1.01□□□□□ -2.25
TY1B-AO13527 YBR064WYBR064W 429 nt1.01□□□□□ -2.25
TY1B-AO13527 SMC1YFL008W 3678 nt1.01□□□□□ -2.25
TY1B-AO13527 ISD11YER048W-A 285 nt1□□□□□ -2.25
TY1B-AO13527 CSE2YNR010W 450 nt1□□□□□ -2.25
TY1B-AO13527 tF(GAA)BtF(GAA)B 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)FtF(GAA)F 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)GtF(GAA)G 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)H1tF(GAA)H1 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)H2tF(GAA)H2 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)MtF(GAA)M 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)P1tF(GAA)P1 73 nt0.99□□□□□ -2.25
TY1B-AO13527 tF(GAA)P2tF(GAA)P2 73 nt0.99□□□□□ -2.25
TY1B-AO13527 YOR011W-AYOR011W-A 207 nt0.99□□□□□ -2.25
TY1B-AO13527 SPO21YOL091W 1830 nt0.99□□□□□ -2.25
TY1B-AO13527 QCR9YGR183C 201 nt0.98□□□□□ -2.25
TY1B-AO13527 YGL052WYGL052W 306 nt0.97□□□□□ -2.25
TY1B-AO13527 YMR172C-AYMR172C-A 384 nt0.97□□□□□ -2.25
TY1B-AO13527 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
TY1B-AO13527 OLI1Q0130 231 nt0.96□□□□□ -2.26
TY1B-AO13527 YLR120W-AYLR120W-A 102 nt0.96□□□□□ -2.26
TY1B-AO13527 YNL028WYNL028W 318 nt0.96□□□□□ -2.26
TY1B-AO13527 YOR008C-AYOR008C-A 225 nt0.96□□□□□ -2.26
TY1B-AO13527 MYO1YHR023W 5787 nt0.95□□□□□ -2.26
TY1B-AO13527 NPR2YEL062W 1848 nt0.95□□□□□ -2.26
TY1B-AO13527 snR74snR74 88 nt0.95□□□□□ -2.26
TY1B-AO13527 PAA1YDR071C 576 nt0.95□□□□□ -2.26
TY1B-AO13527 YGL188C-AYGL188C-A 141 nt0.95□□□□□ -2.26
TY1B-AO13527 YJL197C-AYJL197C-A 282 nt0.95□□□□□ -2.26
TY1B-AO13527 YMR160WYMR160W 2451 nt0.95□□□□□ -2.26
TY1B-AO13527 snR49snR49 165 nt0.94□□□□□ -2.26
TY1B-AO13527 YDL196WYDL196W 330 nt0.93□□□□□ -2.26
TY1B-AO13527 RPS27BYHR021C 249 nt0.93□□□□□ -2.26
TY1B-AO13527 ABF2YMR072W 552 nt0.93□□□□□ -2.26
TY1B-AO13527 IES4YOR189W 351 nt0.93□□□□□ -2.26
TY1B-AO13527 YOR218CYOR218C 420 nt0.93□□□□□ -2.26
TY1B-AO13527 NOP9YJL010C 2001 nt0.93□□□□□ -2.26
TY1B-AO13527 ECM12YHR021W-A 456 nt0.92□□□□□ -2.26
TY1B-AO13527 CMC4YMR194C-B 222 nt0.92□□□□□ -2.26
TY1B-AO13527 YOL155W-AYOL155W-A 135 nt0.92□□□□□ -2.26
TY1B-AO13527 YPL044CYPL044C 549 nt0.92□□□□□ -2.26
TY1B-AO13527 YPR092WYPR092W 306 nt0.92□□□□□ -2.26
TY1B-AO13527 snR55snR55 98 nt0.91□□□□□ -2.26
TY1B-AO13527 tF(GAA)QtF(GAA)Q 75 nt0.91□□□□□ -2.26
TY1B-AO13527 YOR302WYOR302W 78 nt0.91□□□□□ -2.26
TY1B-AO13527 GEA2YEL022W 4380 nt0.89□□□□□ -2.27
TY1B-AO13527 JLP2YMR132C 627 nt0.89□□□□□ -2.27
TY1B-AO13527 YMR307C-AYMR307C-A 195 nt0.89□□□□□ -2.27
TY1B-AO13527 SGF11YPL047W 300 nt0.89□□□□□ -2.27
TY1B-AO13527 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
TY1B-AO13527 YDR354C-AYDR354C-A 144 nt0.87□□□□□ -2.27
TY1B-AO13527 RPL26BYGR034W 384 nt0.87□□□□□ -2.27
TY1B-AO13527 PMP1YCR024C-A 123 nt0.86□□□□□ -2.27
TY1B-AO13527 YLL019W-AYLL019W-A 93 nt0.86□□□□□ -2.27
TY1B-AO13527 YNL211CYNL211C 261 nt0.86□□□□□ -2.27
TY1B-AO13527 YBR131C-AYBR131C-A 90 nt0.86□□□□□ -2.27
TY1B-AO13527 PRP16YKR086W 3216 nt0.86□□□□□ -2.27
TY1B-AO13527 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
TY1B-AO13527 YIR030W-AYIR030W-A 384 nt0.84□□□□□ -2.27
TY1B-AO13527 SPG3YDR504C 384 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)BtT(AGU)B 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)CtT(AGU)C 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)DtT(AGU)D 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)HtT(AGU)H 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)I1tT(AGU)I1 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)I2tT(AGU)I2 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)JtT(AGU)J 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)N1tT(AGU)N1 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)N2tT(AGU)N2 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)O1tT(AGU)O1 73 nt0.83□□□□□ -2.28
TY1B-AO13527 tT(AGU)O2tT(AGU)O2 73 nt0.83□□□□□ -2.28
TY1B-AO13527 YOR345CYOR345C 351 nt0.83□□□□□ -2.28
TY1B-AO13527 LTE1YAL024C 4308 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms