Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm16274-201ENSMUST00000139251 592 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm16250-201ENSMUST00000148974 256 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm22236-201ENSMUST00000157093 106 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm17153-201ENSMUST00000171314 490 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm8221-201ENSMUST00000178052 564 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm23648-201ENSMUST00000180301 107 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Mir6341-201ENSMUST00000183490 121 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Mir7222-201ENSMUST00000183740 75 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm20203-201ENSMUST00000192352 332 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm43855-201ENSMUST00000197462 507 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm43114-201ENSMUST00000198298 343 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm45146-201ENSMUST00000207108 221 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm18672-201ENSMUST00000208035 270 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm44909-201ENSMUST00000208756 165 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm45434-201ENSMUST00000210550 293 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm2628-201ENSMUST00000218019 426 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm23506-201ENSMUST00000083077 107 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm7381-201ENSMUST00000098958 300 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Brf1Q8CFK2 Gm18180-201ENSMUST00000187562 1484 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm38104-201ENSMUST00000195121 1895 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm28362-201ENSMUST00000189430 2420 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Mir883a-201ENSMUST00000104824 76 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm15060-201ENSMUST00000119550 948 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm5060-201ENSMUST00000120072 599 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm14903-201ENSMUST00000122435 537 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm22211-201ENSMUST00000158097 156 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm15946-201ENSMUST00000160654 423 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm23619-201ENSMUST00000178411 94 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm25474-201ENSMUST00000179052 94 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm22047-201ENSMUST00000179176 94 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm22307-201ENSMUST00000180019 107 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm38109-201ENSMUST00000195386 181 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm42818-201ENSMUST00000198869 987 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm42828-201ENSMUST00000199669 469 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm43227-201ENSMUST00000202239 677 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5□□□□□ -1.61
Brf1Q8CFK2 AC174797.3-202ENSMUST00000224578 587 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm29730-201ENSMUST00000192986 1396 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm44321-201ENSMUST00000204262 2855 ntBASIC5□□□□□ -1.61
Brf1Q8CFK2 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Brf1Q8CFK2 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5□□□□□ -1.61
Brf1Q8CFK2 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Mir147-201ENSMUST00000102354 79 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Mir676-201ENSMUST00000102443 89 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm16431-201ENSMUST00000117454 431 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm6591-201ENSMUST00000121063 434 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm14577-201ENSMUST00000121134 256 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm26036-201ENSMUST00000158149 144 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Mir5101-201ENSMUST00000175181 83 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm23215-201ENSMUST00000178153 121 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Mir6963-201ENSMUST00000183535 71 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm17887-201ENSMUST00000200194 547 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm42579-201ENSMUST00000200512 734 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm19457-201ENSMUST00000200995 448 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm43028-201ENSMUST00000202561 481 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm44125-201ENSMUST00000203068 448 ntBASIC4.99□□□□□ -1.61
Brf1Q8CFK2 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 153.4 ms