Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Gm9587-201ENSMUST00000172449 454 ntBASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Gm22923-201ENSMUST00000174952 110 ntBASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Gm25820-202ENSMUST00000197479 128 ntBASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Gm24207-201ENSMUST00000082781 108 ntBASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col4a4Q9QZR9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Trbv10-201ENSMUST00000168322 289 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm24561-201ENSMUST00000175182 95 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm25528-201ENSMUST00000180264 132 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm42990-201ENSMUST00000199231 312 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm45452-201ENSMUST00000210905 177 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 AC139294.1-201ENSMUST00000226708 571 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm26121-201ENSMUST00000083364 162 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col4a4Q9QZR9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm11905-201ENSMUST00000117653 678 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm22254-201ENSMUST00000179186 110 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm26993-201ENSMUST00000182766 789 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm8392-201ENSMUST00000185647 835 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm20162-201ENSMUST00000193629 871 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm44308-201ENSMUST00000197080 99 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm5552-201ENSMUST00000197149 515 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm43368-201ENSMUST00000200638 409 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm10242-201ENSMUST00000090064 330 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm14943-201ENSMUST00000118056 546 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm12118-201ENSMUST00000119766 532 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Mir5127-201ENSMUST00000175295 71 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm17967-201ENSMUST00000195319 647 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm34314-201ENSMUST00000203622 367 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col4a4Q9QZR9 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm14890-201ENSMUST00000117660 676 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm27468-201ENSMUST00000183577 106 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.1□□□□□ -1.91
Col4a4Q9QZR9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms