Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm19503-201ENSMUST00000187109 241 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm26439-201ENSMUST00000082592 106 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Snord22-201ENSMUST00000083153 126 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm11262-201ENSMUST00000119326 833 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm14714-201ENSMUST00000119743 439 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm14413-201ENSMUST00000122158 408 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm25913-201ENSMUST00000157617 135 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm24402-201ENSMUST00000157873 91 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm25520-201ENSMUST00000158389 118 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm24315-201ENSMUST00000177835 127 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm28974-201ENSMUST00000187893 231 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm43601-201ENSMUST00000196294 945 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm43578-201ENSMUST00000201250 459 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm44910-201ENSMUST00000208451 396 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm45439-201ENSMUST00000211723 359 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 AC157017.2-201ENSMUST00000218354 777 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm23460-201ENSMUST00000083258 109 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Gm23733-201ENSMUST00000083750 106 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Brf1Q8CFK2 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm25726-201ENSMUST00000104529 129 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm14793-201ENSMUST00000118739 311 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm11325-201ENSMUST00000119967 469 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm12691-201ENSMUST00000120186 456 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm23171-201ENSMUST00000157159 264 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm25965-201ENSMUST00000157170 93 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm6486-201ENSMUST00000166202 434 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm21754-201ENSMUST00000177550 479 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm21991-201ENSMUST00000180006 508 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm27957-201ENSMUST00000184054 127 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Mir496b-201ENSMUST00000184935 113 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm7654-201ENSMUST00000186738 683 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm18900-201ENSMUST00000193218 584 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm42814-201ENSMUST00000199370 460 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm4045-201ENSMUST00000204076 310 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm4501-201ENSMUST00000207330 551 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm4558-201ENSMUST00000207886 521 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm4528-201ENSMUST00000207905 551 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm45498-201ENSMUST00000210346 283 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm3690-201ENSMUST00000211341 262 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm39197-201ENSMUST00000212069 457 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm46138-201ENSMUST00000215294 426 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm18774-201ENSMUST00000218269 601 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Neat1-201ENSMUST00000173672 20771 ntBASIC5.04□□□□□ -1.6
Brf1Q8CFK2 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 184.5 ms