Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm24788-201ENSMUST00000104283 156 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm7974-201ENSMUST00000117154 408 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm14163-201ENSMUST00000117342 217 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm11262-201ENSMUST00000119326 833 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm12607-201ENSMUST00000120724 493 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm6373-201ENSMUST00000121026 360 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm22453-201ENSMUST00000122801 318 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm22491-201ENSMUST00000157190 102 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm22076-201ENSMUST00000158601 84 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm24675-201ENSMUST00000158757 259 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm15946-201ENSMUST00000160654 423 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm24315-201ENSMUST00000177835 127 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm27899-201ENSMUST00000184715 64 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm19503-201ENSMUST00000187109 241 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm37353-201ENSMUST00000194497 313 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm37836-201ENSMUST00000195875 175 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm43649-201ENSMUST00000196596 391 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm42830-201ENSMUST00000196642 313 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Mir142-201ENSMUST00000198092 64 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm19908-201ENSMUST00000204684 391 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim9Q8C7M3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm24430-201ENSMUST00000104077 104 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm5060-201ENSMUST00000120072 599 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm2768-201ENSMUST00000121062 250 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm11254-201ENSMUST00000122368 653 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm29216-201ENSMUST00000187117 492 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm29634-201ENSMUST00000188467 696 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm28699-201ENSMUST00000189193 696 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm20811-201ENSMUST00000190500 553 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm42990-201ENSMUST00000199231 312 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm43505-201ENSMUST00000200579 139 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm43892-201ENSMUST00000204373 265 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm19232-201ENSMUST00000211621 652 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm22810-201ENSMUST00000082741 158 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm22350-201ENSMUST00000083924 156 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim9Q8C7M3 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.66□□□□□ -1.66
Trim9Q8C7M3 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim9Q8C7M3 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim9Q8C7M3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim9Q8C7M3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim9Q8C7M3 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms