Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Mir6401-201ENSMUST00000184499 109 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm27899-201ENSMUST00000184715 64 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm6802-202ENSMUST00000186566 126 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm43708-201ENSMUST00000198857 961 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm7786-201ENSMUST00000210494 436 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm45742-201ENSMUST00000212400 433 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC069561.2-201ENSMUST00000217596 420 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm22810-201ENSMUST00000082741 158 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Mir383-201ENSMUST00000083523 70 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm25848-201ENSMUST00000116790 144 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm23226-201ENSMUST00000116927 103 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm25507-201ENSMUST00000116981 144 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm12891-201ENSMUST00000119358 240 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm22199-201ENSMUST00000122660 126 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm25553-201ENSMUST00000158076 79 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm22076-201ENSMUST00000158601 84 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm27539-201ENSMUST00000184971 224 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm28474-201ENSMUST00000188501 315 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm29479-201ENSMUST00000190352 455 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm18296-201ENSMUST00000192475 783 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm43730-201ENSMUST00000199863 372 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm8132-201ENSMUST00000204938 640 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm7093-201ENSMUST00000223004 581 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.09□□□□□ -1.59
Brf1Q8CFK2 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Brf1Q8CFK2 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Brf1Q8CFK2 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.09□□□□□ -1.6
Brf1Q8CFK2 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Brf1Q8CFK2 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Brf1Q8CFK2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Mir193b-201ENSMUST00000103784 79 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm13614-201ENSMUST00000117306 503 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm14358-201ENSMUST00000118458 403 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm14975-201ENSMUST00000118741 664 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm12190-201ENSMUST00000120001 187 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm11438-201ENSMUST00000121582 189 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm25873-201ENSMUST00000180317 107 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Mir7031-201ENSMUST00000183860 65 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm27286-201ENSMUST00000184934 179 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 226.9 ms