Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm25270-201ENSMUST00000122606 138 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm25280-201ENSMUST00000157269 101 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm27445-201ENSMUST00000184484 72 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm38075-201ENSMUST00000191979 920 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm10025-201ENSMUST00000079568 372 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm23377-201ENSMUST00000082943 126 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm24541-201ENSMUST00000103871 96 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm26423-201ENSMUST00000104277 128 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm13167-201ENSMUST00000118554 578 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm23963-201ENSMUST00000179603 77 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col4a4Q9QZR9 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.21□□□□□ -1.89
Col4a4Q9QZR9 Gm20342-201ENSMUST00000185480 9720 ntBASIC3.21□□□□□ -1.89
Col4a4Q9QZR9 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.21□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm13329-201ENSMUST00000117063 265 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm23231-201ENSMUST00000157299 104 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm18604-201ENSMUST00000172535 558 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm28923-201ENSMUST00000187755 322 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm20997-201ENSMUST00000205148 231 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm21112-201ENSMUST00000212224 578 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm7760-201ENSMUST00000212265 578 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm4945-201ENSMUST00000075152 453 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col4a4Q9QZR9 Gm23766-201ENSMUST00000103894 80 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm14570-201ENSMUST00000119444 391 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm5392-201ENSMUST00000122189 789 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm22227-201ENSMUST00000157356 259 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm24675-201ENSMUST00000158757 259 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm44092-201ENSMUST00000204470 258 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm43974-201ENSMUST00000205080 684 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm45789-201ENSMUST00000213038 364 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm37363-201ENSMUST00000192336 2233 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm22532-201ENSMUST00000158822 140 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm17117-201ENSMUST00000163665 299 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm28871-201ENSMUST00000186191 687 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm37319-201ENSMUST00000193500 636 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm35405-201ENSMUST00000218754 400 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms