Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm31931-201ENSMUST00000219666 222 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm23987-201ENSMUST00000117039 129 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm13574-201ENSMUST00000120482 394 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm16179-201ENSMUST00000120685 373 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm22156-201ENSMUST00000158409 141 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm27414-201ENSMUST00000185033 381 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm28872-201ENSMUST00000191518 158 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm37670-201ENSMUST00000193622 229 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm43649-201ENSMUST00000196596 391 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm35702-201ENSMUST00000198653 511 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm45171-201ENSMUST00000206360 736 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm45316-201ENSMUST00000210128 162 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Gm22265-201ENSMUST00000082947 116 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Mir215-201ENSMUST00000083628 112 ntBASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Brf1Q8CFK2 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm22778-201ENSMUST00000104090 128 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm24788-201ENSMUST00000104283 156 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm12340-201ENSMUST00000121617 462 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm23981-201ENSMUST00000157136 106 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm25667-201ENSMUST00000157701 275 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm26354-201ENSMUST00000158221 129 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm22841-201ENSMUST00000158443 62 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm23023-201ENSMUST00000158767 109 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm23568-201ENSMUST00000177960 92 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm24829-201ENSMUST00000179245 92 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm29428-201ENSMUST00000190086 409 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm43370-201ENSMUST00000196437 284 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm23447-201ENSMUST00000082798 163 ntBASIC5.11□□□□□ -1.59
Brf1Q8CFK2 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Brf1Q8CFK2 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.1□□□□□ -1.59
Brf1Q8CFK2 Gm14766-201ENSMUST00000121689 367 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms