Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.16□□□□□ -1.58
Brf1Q8CFK2 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Brf1Q8CFK2 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Brf1Q8CFK2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Brf1Q8CFK2 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Brf1Q8CFK2 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Brf1Q8CFK2 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm14304-201ENSMUST00000117272 446 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm11843-201ENSMUST00000118984 425 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm27254-201ENSMUST00000183926 517 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm17929-201ENSMUST00000186851 627 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm5252-201ENSMUST00000189030 909 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm29097-201ENSMUST00000190273 422 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm3148-201ENSMUST00000203594 612 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm8125-201ENSMUST00000216602 738 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.15□□□□□ -1.59
Brf1Q8CFK2 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm22657-201ENSMUST00000104197 132 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm24590-201ENSMUST00000116699 119 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm7429-201ENSMUST00000118664 348 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm15443-201ENSMUST00000118947 820 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm4852-201ENSMUST00000121202 729 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm14977-201ENSMUST00000121626 812 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm27317-201ENSMUST00000183533 95 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm29389-201ENSMUST00000191562 352 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm43224-201ENSMUST00000201567 898 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm17780-201ENSMUST00000207142 612 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm44946-201ENSMUST00000208425 572 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm23097-201ENSMUST00000083448 105 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.14□□□□□ -1.59
Brf1Q8CFK2 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm26019-201ENSMUST00000104407 119 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm24855-201ENSMUST00000104848 97 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm15266-201ENSMUST00000119635 255 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm22453-201ENSMUST00000122801 318 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Mir6537-201ENSMUST00000184150 110 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm29475-201ENSMUST00000190767 312 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm36954-201ENSMUST00000195362 363 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Gm44032-201ENSMUST00000204841 166 ntBASIC5.13□□□□□ -1.59
Brf1Q8CFK2 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 186.5 ms