Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col4a4Q9QZR9 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.29□□□□□ -1.88
Col4a4Q9QZR9 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.29□□□□□ -1.88
Col4a4Q9QZR9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Mir344c-201ENSMUST00000103919 92 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm11923-201ENSMUST00000118135 508 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm11881-201ENSMUST00000119408 572 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm24691-201ENSMUST00000157762 140 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm28967-201ENSMUST00000187351 281 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm42824-201ENSMUST00000199361 247 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Mir504-201ENSMUST00000093602 79 ntBASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a4Q9QZR9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Col4a4Q9QZR9 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Col4a4Q9QZR9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm24380-201ENSMUST00000122696 324 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm4468-201ENSMUST00000170206 294 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm25025-201ENSMUST00000175018 111 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Snord92-201ENSMUST00000175548 85 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm6140-201ENSMUST00000192494 966 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm45066-201ENSMUST00000207528 2551 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm13064-201ENSMUST00000119125 557 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm23958-201ENSMUST00000157207 105 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm3123-201ENSMUST00000163480 480 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm20651-201ENSMUST00000177219 329 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm43521-201ENSMUST00000197838 255 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm43107-201ENSMUST00000198729 255 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm43651-201ENSMUST00000199796 439 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Gm43845-201ENSMUST00000202462 1820 ntBASIC3.27□□□□□ -1.89
Col4a4Q9QZR9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm12001-201ENSMUST00000121727 913 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm12226-201ENSMUST00000144172 876 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Mir3965-201ENSMUST00000175570 69 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm26061-201ENSMUST00000175584 108 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm28594-201ENSMUST00000187022 661 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms