Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Mre11Q61216 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Mre11Q61216 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mre11Q61216 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mre11Q61216 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Mre11Q61216 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mre11Q61216 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Mre11Q61216 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Mre11Q61216 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mre11Q61216 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Mre11Q61216 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Mre11Q61216 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.82■□□□□ 0.92
Mre11Q61216 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Mre11Q61216 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Mre11Q61216 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Mre11Q61216 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Mre11Q61216 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.82■□□□□ 0.92
Mre11Q61216 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mre11Q61216 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Mre11Q61216 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Mre11Q61216 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mre11Q61216 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mre11Q61216 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mre11Q61216 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.8■□□□□ 0.92
Mre11Q61216 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.8■□□□□ 0.92
Mre11Q61216 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Mre11Q61216 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.8■□□□□ 0.92
Mre11Q61216 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.8■□□□□ 0.92
Mre11Q61216 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Mre11Q61216 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Mre11Q61216 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mre11Q61216 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mre11Q61216 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mre11Q61216 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mre11Q61216 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mre11Q61216 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Mre11Q61216 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.79■□□□□ 0.92
Mre11Q61216 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.79■□□□□ 0.92
Mre11Q61216 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mre11Q61216 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Mre11Q61216 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mre11Q61216 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mre11Q61216 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.78■□□□□ 0.92
Mre11Q61216 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.78■□□□□ 0.92
Mre11Q61216 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.78■□□□□ 0.92
Mre11Q61216 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.78■□□□□ 0.92
Mre11Q61216 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Mre11Q61216 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mre11Q61216 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.77■□□□□ 0.92
Mre11Q61216 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms