Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.56■■□□□ 1.25e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.95e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-209ENST00000563674 719 ntTSL 320.55■□□□□ 0.885e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-212ENST00000567536 484 ntTSL 320.34■□□□□ 0.855e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.65e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.25■□□□□ 0.355e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.03■□□□□ 0.165e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.64■□□□□ 0.095e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.59■□□□□ 0.095e-6■□□□□ 10.3
DDX59Q5T1V6 SH2B1-210ENST00000566176 546 ntTSL 48.2□□□□□ -1.15e-6■□□□□ 10.3
DDX59Q5T1V6 AC104809.2-202ENST00000457369 800 ntTSL 315.59■□□□□ 0.093e-7■□□□□ 10.3
DDX59Q5T1V6 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.439e-8■□□□□ 10.3
DDX59Q5T1V6 ZCCHC14-204ENST00000568020 6242 ntTSL 1 (best)12.34□□□□□ -0.439e-8■□□□□ 10.3
DDX59Q5T1V6 PPP6R2-207ENST00000470046 1211 ntTSL 216.81■□□□□ 0.285e-7■□□□□ 10.2
DDX59Q5T1V6 ILF3-216ENST00000589600 839 ntTSL 522.42■■□□□ 1.184e-7■□□□□ 10.2
DDX59Q5T1V6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.18■□□□□ 0.664e-7■□□□□ 10.2
DDX59Q5T1V6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.294e-7■□□□□ 10.2
DDX59Q5T1V6 ILF3-213ENST00000589283 599 ntTSL 312.11□□□□□ -0.474e-7■□□□□ 10.2
DDX59Q5T1V6 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.99□□□□□ -0.494e-7■□□□□ 10.2
DDX59Q5T1V6 ILF3-208ENST00000587928 4230 ntTSL 210.64□□□□□ -0.714e-7■□□□□ 10.2
DDX59Q5T1V6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.251e-13■□□□□ 10.2
DDX59Q5T1V6 STK39-203ENST00000487143 2214 ntTSL 1 (best)6.27□□□□□ -1.411e-13■□□□□ 10.2
DDX59Q5T1V6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.691e-6■□□□□ 10.2
DDX59Q5T1V6 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.581e-6■□□□□ 10.2
DDX59Q5T1V6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 12e-9■□□□□ 10.2
DDX59Q5T1V6 ZYX-202ENST00000354434 2050 ntAPPRIS ALT2 TSL 214.33□□□□□ -0.122e-9■□□□□ 10.2
DDX59Q5T1V6 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.42e-9■□□□□ 10.2
DDX59Q5T1V6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.08□□□□□ -0.321e-7■□□□□ 10.2
DDX59Q5T1V6 ASPSCR1-217ENST00000583693 3976 ntTSL 212.49□□□□□ -0.413e-8■□□□□ 10.2
DDX59Q5T1V6 ATXN2L-224ENST00000569318 559 ntTSL 514.38□□□□□ -0.112e-15■□□□□ 10.2
DDX59Q5T1V6 ASPSCR1-210ENST00000581608 2387 ntTSL 219.83■□□□□ 0.763e-8■□□□□ 10.2
DDX59Q5T1V6 ASPSCR1-221ENST00000585274 984 ntTSL 516.21■□□□□ 0.193e-8■□□□□ 10.2
DDX59Q5T1V6 ASPSCR1-218ENST00000583744 539 ntTSL 413.87□□□□□ -0.193e-8■□□□□ 10.2
DDX59Q5T1V6 ASPSCR1-205ENST00000578236 3277 ntTSL 213.34□□□□□ -0.273e-8■□□□□ 10.2
DDX59Q5T1V6 ASPSCR1-206ENST00000578361 590 ntTSL 213.23□□□□□ -0.293e-8■□□□□ 10.2
DDX59Q5T1V6 ATXN2L-221ENST00000566946 2162 ntTSL 1 (best)19.42■□□□□ 0.71e-15■□□□□ 10.2
DDX59Q5T1V6 ATXN2L-208ENST00000562583 1933 ntTSL 1 (best)16.72■□□□□ 0.271e-15■□□□□ 10.2
DDX59Q5T1V6 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)15□□□□□ -0.011e-15■□□□□ 10.2
DDX59Q5T1V6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.311e-7■□□□□ 10.2
DDX59Q5T1V6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.743e-6■□□□□ 10.1
DDX59Q5T1V6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.423e-6■□□□□ 10.1
DDX59Q5T1V6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.423e-6■□□□□ 10.1
DDX59Q5T1V6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.423e-6■□□□□ 10.1
DDX59Q5T1V6 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.853e-6■□□□□ 10.1
DDX59Q5T1V6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.42e-6■□□□□ 10.1
DDX59Q5T1V6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.17■□□□□ 0.821e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-208ENST00000473263 574 ntTSL 418.88■□□□□ 0.612e-6■□□□□ 10.1
DDX59Q5T1V6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.481e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.79■□□□□ 0.442e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC10-209ENST00000471375 928 ntTSL 517.56■□□□□ 0.43e-8■□□□□ 10.1
DDX59Q5T1V6 AC104452.1-208ENST00000636461 5083 ntTSL 517.5■□□□□ 0.391e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-218ENST00000544696 567 ntTSL 316.84■□□□□ 0.292e-6■□□□□ 10.1
DDX59Q5T1V6 MYADM-207ENST00000421337 1009 ntTSL 216.66■□□□□ 0.262e-6■□□□□ 10.1
DDX59Q5T1V6 FADS1-215ENST00000541683 1844 ntTSL 216.45■□□□□ 0.222e-6■□□□□ 10.1
DDX59Q5T1V6 FADS1-217ENST00000544309 581 ntTSL 316.26■□□□□ 0.192e-6■□□□□ 10.1
DDX59Q5T1V6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.07■□□□□ 0.163e-8■□□□□ 10.1
DDX59Q5T1V6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.153e-8■□□□□ 10.1
DDX59Q5T1V6 KLHL17-202ENST00000463212 955 ntTSL 1 (best)15.71■□□□□ 0.111e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-202ENST00000421879 583 ntTSL 315.56■□□□□ 0.082e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC10-211ENST00000476310 847 ntTSL 315.14■□□□□ 0.013e-8■□□□□ 10.1
DDX59Q5T1V6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.12■□□□□ 0.011e-9■□□□□ 10.1
DDX59Q5T1V6 HM13-219ENST00000487964 902 ntTSL 514.93□□□□□ -0.022e-6■□□□□ 10.1
DDX59Q5T1V6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-6■□□□□ 10.1
DDX59Q5T1V6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.062e-6■□□□□ 10.1
DDX59Q5T1V6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.3□□□□□ -0.122e-6■□□□□ 10.1
DDX59Q5T1V6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.131e-9■□□□□ 10.1
DDX59Q5T1V6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.181e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-207ENST00000466716 640 ntTSL 513.86□□□□□ -0.192e-6■□□□□ 10.1
DDX59Q5T1V6 NICN1-203ENST00000423832 2040 ntTSL 513.66□□□□□ -0.221e-9■□□□□ 10.1
DDX59Q5T1V6 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.262e-6■□□□□ 10.1
DDX59Q5T1V6 LTBP3-206ENST00000526825 1002 ntTSL 513.4□□□□□ -0.261e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-209ENST00000491310 525 ntTSL 513.04□□□□□ -0.322e-6■□□□□ 10.1
DDX59Q5T1V6 AC104452.1-206ENST00000637088 6740 ntTSL 512.94□□□□□ -0.341e-9■□□□□ 10.1
DDX59Q5T1V6 TRAF4-215ENST00000584944 825 ntTSL 212.75□□□□□ -0.371e-9■□□□□ 10.1
DDX59Q5T1V6 AC104452.1-205ENST00000638079 3146 ntTSL 512.18□□□□□ -0.461e-9■□□□□ 10.1
DDX59Q5T1V6 FADS1-203ENST00000424501 926 ntTSL 311.93□□□□□ -0.52e-6■□□□□ 10.1
DDX59Q5T1V6 FADS1-214ENST00000540767 742 ntTSL 311.73□□□□□ -0.532e-6■□□□□ 10.1
DDX59Q5T1V6 HM13-207ENST00000464173 587 ntTSL 211.7□□□□□ -0.542e-6■□□□□ 10.1
DDX59Q5T1V6 FADS1-205ENST00000448607 559 ntTSL 411.4□□□□□ -0.582e-6■□□□□ 10.1
DDX59Q5T1V6 AC104452.1-201ENST00000638115 4453 ntTSL 511.14□□□□□ -0.631e-9■□□□□ 10.1
DDX59Q5T1V6 HM13-217ENST00000483310 755 ntTSL 310.81□□□□□ -0.682e-6■□□□□ 10.1
DDX59Q5T1V6 AC104452.1-207ENST00000638014 4510 ntTSL 510.8□□□□□ -0.681e-9■□□□□ 10.1
DDX59Q5T1V6 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.721e-9■□□□□ 10.1
DDX59Q5T1V6 HM13-209ENST00000464661 906 ntTSL 310.45□□□□□ -0.742e-6■□□□□ 10.1
DDX59Q5T1V6 NICN1-207ENST00000497742 1743 ntTSL 510.01□□□□□ -0.811e-9■□□□□ 10.1
DDX59Q5T1V6 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.952e-6■□□□□ 10.1
DDX59Q5T1V6 ASPSCR1-215ENST00000583142 532 ntTSL 39.8□□□□□ -0.843e-8■□□□□ 10.1
DDX59Q5T1V6 ARHGEF10L-209ENST00000495593 2261 ntTSL 215.25■□□□□ 0.035e-6■□□□□ 10.1
DDX59Q5T1V6 SLC22A18-211ENST00000495518 588 ntTSL 214.54□□□□□ -0.082e-7■□□□□ 10.1
DDX59Q5T1V6 ASPSCR1-204ENST00000577733 5503 ntTSL 216.58■□□□□ 0.243e-8■□□□□ 10.1
DDX59Q5T1V6 HDAC5-205ENST00000587135 504 ntTSL 217.61■□□□□ 0.417e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC5-209ENST00000588703 445 ntTSL 316.23■□□□□ 0.197e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.137e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.36■□□□□ 0.057e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC5-210ENST00000591714 667 ntTSL 315.02■□□□□ -07e-6■□□□□ 10.1
DDX59Q5T1V6 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.587e-6■□□□□ 10.1
DDX59Q5T1V6 PHYHIPL-204ENST00000486074 1971 ntTSL 28.95□□□□□ -0.983e-6■□□□□ 10.1
DDX59Q5T1V6 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.123e-6■□□□□ 10.1
DDX59Q5T1V6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.35□□□□□ -1.393e-6■□□□□ 10.1
DDX59Q5T1V6 PCBP2-225ENST00000553064 1786 ntTSL 512.87□□□□□ -0.357e-17■□□□□ 10.1
Retrieved 100 of 7,289 protein–RNA pairs in 316.4 ms