Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 YDL073WYDL073W 2955 nt0.58□□□□□ -2.32
MSA1Q08471 TRS65YGR166W 1683 nt0.58□□□□□ -2.32
MSA1Q08471 RAD34YDR314C 2079 nt0.58□□□□□ -2.32
MSA1Q08471 GEA2YEL022W 4380 nt0.57□□□□□ -2.32
MSA1Q08471 NHP2YDL208W 471 nt0.57□□□□□ -2.32
MSA1Q08471 SWF1YDR126W 1011 nt0.57□□□□□ -2.32
MSA1Q08471 YER006C-AYER006C-A 318 nt0.57□□□□□ -2.32
MSA1Q08471 YHL042WYHL042W 453 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
MSA1Q08471 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
MSA1Q08471 YLL007CYLL007C 1998 nt0.56□□□□□ -2.32
MSA1Q08471 snR72snR72 98 nt0.56□□□□□ -2.32
MSA1Q08471 SDH7YDR511W 402 nt0.56□□□□□ -2.32
MSA1Q08471 YDR521WYDR521W 336 nt0.56□□□□□ -2.32
MSA1Q08471 YOR192C-CYOR192C-C 237 nt0.56□□□□□ -2.32
MSA1Q08471 snR189snR189 189 nt0.56□□□□□ -2.32
MSA1Q08471 INP2YMR163C 2118 nt0.56□□□□□ -2.32
MSA1Q08471 YKL083WYKL083W 615 nt0.55□□□□□ -2.32
MSA1Q08471 YMR031W-AYMR031W-A 327 nt0.55□□□□□ -2.32
MSA1Q08471 YMR272W-AYMR272W-A 114 nt0.55□□□□□ -2.32
MSA1Q08471 PTP2YOR208W 2253 nt0.54□□□□□ -2.32
MSA1Q08471 BIR1YJR089W 2865 nt0.54□□□□□ -2.32
MSA1Q08471 YGR174W-AYGR174W-A 87 nt0.54□□□□□ -2.32
MSA1Q08471 YAR047CYAR047C 321 nt0.54□□□□□ -2.32
MSA1Q08471 LTE1YAL024C 4308 nt0.54□□□□□ -2.32
MSA1Q08471 ECM12YHR021W-A 456 nt0.53□□□□□ -2.32
MSA1Q08471 RPL26AYLR344W 384 nt0.53□□□□□ -2.32
MSA1Q08471 TOM22YNL131W 459 nt0.53□□□□□ -2.32
MSA1Q08471 YOR218CYOR218C 420 nt0.53□□□□□ -2.32
MSA1Q08471 snR41snR41 95 nt0.53□□□□□ -2.32
MSA1Q08471 YEL030C-AYEL030C-A 315 nt0.52□□□□□ -2.33
MSA1Q08471 YLR101CYLR101C 396 nt0.52□□□□□ -2.33
MSA1Q08471 YNL303WYNL303W 348 nt0.52□□□□□ -2.33
MSA1Q08471 UTP8YGR128C 2142 nt0.52□□□□□ -2.33
MSA1Q08471 CBS1YDL069C 690 nt0.51□□□□□ -2.33
MSA1Q08471 YHL041WYHL041W 450 nt0.51□□□□□ -2.33
MSA1Q08471 PMP1YCR024C-A 123 nt0.5□□□□□ -2.33
MSA1Q08471 YPL044CYPL044C 549 nt0.5□□□□□ -2.33
MSA1Q08471 PCF11YDR228C 1881 nt0.5□□□□□ -2.33
MSA1Q08471 RPL38YLR325C 237 nt0.49□□□□□ -2.33
MSA1Q08471 YPL185WYPL185W 396 nt0.49□□□□□ -2.33
MSA1Q08471 BFR2YDR299W 1605 nt0.49□□□□□ -2.33
MSA1Q08471 PRP16YKR086W 3216 nt0.48□□□□□ -2.33
MSA1Q08471 YDR344CYDR344C 444 nt0.48□□□□□ -2.33
MSA1Q08471 MAM33YIL070C 801 nt0.48□□□□□ -2.33
MSA1Q08471 YBL008W-AYBL008W-A 240 nt0.48□□□□□ -2.33
MSA1Q08471 MYO1YHR023W 5787 nt0.48□□□□□ -2.33
MSA1Q08471 NPR2YEL062W 1848 nt0.48□□□□□ -2.33
MSA1Q08471 ULP2YIL031W 3105 nt0.47□□□□□ -2.33
MSA1Q08471 NOP9YJL010C 2001 nt0.47□□□□□ -2.33
MSA1Q08471 ATG31YDR022C 591 nt0.47□□□□□ -2.33
MSA1Q08471 YAP6YDR259C 1152 nt0.47□□□□□ -2.33
MSA1Q08471 RPS20YHL015W 366 nt0.47□□□□□ -2.33
MSA1Q08471 AI1Q0050 2505 nt0.47□□□□□ -2.33
MSA1Q08471 YML002WYML002W 2214 nt0.46□□□□□ -2.34
MSA1Q08471 UTP10YJL109C 5310 nt0.46□□□□□ -2.34
MSA1Q08471 YML007C-AYML007C-A 111 nt0.45□□□□□ -2.34
MSA1Q08471 MRPL50YNR022C 420 nt0.45□□□□□ -2.34
MSA1Q08471 SPO21YOL091W 1830 nt0.45□□□□□ -2.34
MSA1Q08471 PAA1YDR071C 576 nt0.44□□□□□ -2.34
MSA1Q08471 OLI1Q0130 231 nt0.44□□□□□ -2.34
MSA1Q08471 YPR002C-AYPR002C-A 198 nt0.44□□□□□ -2.34
MSA1Q08471 CHS6YJL099W 2241 nt0.44□□□□□ -2.34
MSA1Q08471 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
MSA1Q08471 YJR011CYJR011C 786 nt0.43□□□□□ -2.34
MSA1Q08471 ATP19YOL077W-A 207 nt0.43□□□□□ -2.34
MSA1Q08471 YBR064WYBR064W 429 nt0.41□□□□□ -2.34
MSA1Q08471 NIP100YPL174C 2607 nt0.41□□□□□ -2.34
MSA1Q08471 RPL26BYGR034W 384 nt0.4□□□□□ -2.35
MSA1Q08471 RPS24BYIL069C 408 nt0.4□□□□□ -2.35
MSA1Q08471 YLR456WYLR456W 615 nt0.4□□□□□ -2.35
MSA1Q08471 BSC3YLR465C 309 nt0.4□□□□□ -2.35
MSA1Q08471 BUL2YML111W 2763 nt0.4□□□□□ -2.35
MSA1Q08471 TAH1YCR060W 336 nt0.39□□□□□ -2.35
MSA1Q08471 YDR426CYDR426C 378 nt0.39□□□□□ -2.35
MSA1Q08471 YIL134C-AYIL134C-A 204 nt0.39□□□□□ -2.35
MSA1Q08471 PCC1YKR095W-A 267 nt0.39□□□□□ -2.35
MSA1Q08471 MLP1YKR095W 5628 nt0.39□□□□□ -2.35
MSA1Q08471 YBR206WYBR206W 324 nt0.38□□□□□ -2.35
MSA1Q08471 MCM10YIL150C 1716 nt0.38□□□□□ -2.35
MSA1Q08471 HMRA2YCR096C 360 nt0.37□□□□□ -2.35
MSA1Q08471 YER078W-AYER078W-A 165 nt0.37□□□□□ -2.35
MSA1Q08471 YKL063CYKL063C 504 nt0.36□□□□□ -2.35
MSA1Q08471 IQG1YPL242C 4488 nt0.34□□□□□ -2.35
MSA1Q08471 PET111YMR257C 2403 nt0.34□□□□□ -2.35
MSA1Q08471 SEC8YPR055W 3198 nt0.34□□□□□ -2.35
MSA1Q08471 YJL127W-AYJL127W-A 117 nt0.34□□□□□ -2.36
MSA1Q08471 YOR053WYOR053W 342 nt0.34□□□□□ -2.36
MSA1Q08471 BEM3YPL115C 3387 nt0.34□□□□□ -2.36
MSA1Q08471 FYV10YIL097W 1551 nt0.33□□□□□ -2.36
MSA1Q08471 YLR406C-AYLR406C-A 150 nt0.33□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 78.1 ms