Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 KOG1YHR186C 4674 nt2.18□□□□□ -2.06
HDA1P53973 YLL007CYLL007C 1998 nt2.18□□□□□ -2.06
HDA1P53973 RTT101YJL047C 2529 nt2.18□□□□□ -2.06
HDA1P53973 IRE1YHR079C 3348 nt2.18□□□□□ -2.06
HDA1P53973 MSH5YDL154W 2706 nt2.18□□□□□ -2.06
HDA1P53973 DGR2YKL121W 2559 nt2.17□□□□□ -2.06
HDA1P53973 CUL3YGR003W 2235 nt2.17□□□□□ -2.06
HDA1P53973 YOR381W-AYOR381W-A 168 nt2.17□□□□□ -2.06
HDA1P53973 NEO1YIL048W 3456 nt2.17□□□□□ -2.06
HDA1P53973 YOR343W-BYOR343W-B 5313 nt2.17□□□□□ -2.06
HDA1P53973 PTP2YOR208W 2253 nt2.16□□□□□ -2.06
HDA1P53973 AGC1YPR021C 2709 nt2.16□□□□□ -2.06
HDA1P53973 SDH6YDR379C-A 240 nt2.16□□□□□ -2.06
HDA1P53973 RPL31AYDL075W 342 nt2.15□□□□□ -2.07
HDA1P53973 YMR272W-BYMR272W-B 108 nt2.15□□□□□ -2.07
HDA1P53973 YOR345CYOR345C 351 nt2.15□□□□□ -2.07
HDA1P53973 UBP2YOR124C 3819 nt2.15□□□□□ -2.07
HDA1P53973 PIG1YLR273C 1947 nt2.15□□□□□ -2.07
HDA1P53973 YCR087C-AYCR087C-A 462 nt2.14□□□□□ -2.07
HDA1P53973 YEL073CYEL073C 324 nt2.14□□□□□ -2.07
HDA1P53973 NCA2YPR155C 1851 nt2.14□□□□□ -2.07
HDA1P53973 PAU3YCR104W 375 nt2.13□□□□□ -2.07
HDA1P53973 YLL019W-AYLL019W-A 93 nt2.13□□□□□ -2.07
HDA1P53973 PIP2YOR363C 2991 nt2.13□□□□□ -2.07
HDA1P53973 AIM44YPL158C 2277 nt2.13□□□□□ -2.07
HDA1P53973 FRK1YPL141C 2598 nt2.12□□□□□ -2.07
HDA1P53973 PEP1YBL017C 4740 nt2.12□□□□□ -2.07
HDA1P53973 YDL196WYDL196W 330 nt2.11□□□□□ -2.07
HDA1P53973 YGR164WYGR164W 336 nt2.11□□□□□ -2.07
HDA1P53973 RPL33BYOR234C 324 nt2.11□□□□□ -2.07
HDA1P53973 IST2YBR086C 2841 nt2.11□□□□□ -2.07
HDA1P53973 YHR210CYHR210C 1026 nt2.1□□□□□ -2.07
HDA1P53973 YOR161W-BYOR161W-B 261 nt2.1□□□□□ -2.07
HDA1P53973 FIG4YNL325C 2640 nt2.1□□□□□ -2.07
HDA1P53973 TOR2YKL203C 7425 nt2.09□□□□□ -2.07
HDA1P53973 SBE22YHR103W 2559 nt2.08□□□□□ -2.08
HDA1P53973 HER1YOR227W 3741 nt2.08□□□□□ -2.08
HDA1P53973 AHC1YOR023C 1701 nt2.08□□□□□ -2.08
HDA1P53973 YLR035C-AYLR035C-A 3468 nt2.08□□□□□ -2.08
HDA1P53973 PBY1YBR094W 2262 nt2.07□□□□□ -2.08
HDA1P53973 SLD3YGL113W 2007 nt2.07□□□□□ -2.08
HDA1P53973 PMP1YCR024C-A 123 nt2.07□□□□□ -2.08
HDA1P53973 YDL118WYDL118W 381 nt2.07□□□□□ -2.08
HDA1P53973 Q0143Q0143 153 nt2.07□□□□□ -2.08
HDA1P53973 SEY1YOR165W 2331 nt2.06□□□□□ -2.08
HDA1P53973 SIR4YDR227W 4077 nt2.06□□□□□ -2.08
HDA1P53973 ALK1YGL021W 2283 nt2.06□□□□□ -2.08
HDA1P53973 YMR175W-AYMR175W-A 195 nt2.05□□□□□ -2.08
HDA1P53973 PKH2YOL100W 3246 nt2.05□□□□□ -2.08
HDA1P53973 COY1YKL179C 2040 nt2.05□□□□□ -2.08
HDA1P53973 YNL144CYNL144C 2223 nt2.05□□□□□ -2.08
HDA1P53973 SLI15YBR156C 2097 nt2.04□□□□□ -2.08
HDA1P53973 COG4YPR105C 2586 nt2.03□□□□□ -2.08
HDA1P53973 SEC63YOR254C 1992 nt2.03□□□□□ -2.08
HDA1P53973 HIR3YJR140C 4947 nt2.03□□□□□ -2.08
HDA1P53973 YDR521WYDR521W 336 nt2.02□□□□□ -2.09
HDA1P53973 MSH6YDR097C 3729 nt2.01□□□□□ -2.09
HDA1P53973 SFB2YNL049C 2631 nt2□□□□□ -2.09
HDA1P53973 PRP42YDR235W 1635 nt2□□□□□ -2.09
HDA1P53973 HAL9YOL089C 3093 nt2□□□□□ -2.09
HDA1P53973 GCN2YDR283C 4980 nt1.99□□□□□ -2.09
HDA1P53973 SNU13YEL026W 381 nt1.99□□□□□ -2.09
HDA1P53973 TDA9YML081W 3756 nt1.99□□□□□ -2.09
HDA1P53973 UTP21YLR409C 2820 nt1.99□□□□□ -2.09
HDA1P53973 IFH1YLR223C 3258 nt1.99□□□□□ -2.09
HDA1P53973 MYO4YAL029C 4416 nt1.99□□□□□ -2.09
HDA1P53973 YBR206WYBR206W 324 nt1.98□□□□□ -2.09
HDA1P53973 UBR2YLR024C 5619 nt1.98□□□□□ -2.09
HDA1P53973 YHR214C-BYHR214C-B 5382 nt1.97□□□□□ -2.09
HDA1P53973 ATG9YDL149W 2994 nt1.97□□□□□ -2.09
HDA1P53973 YMR045CYMR045C 5268 nt1.97□□□□□ -2.09
HDA1P53973 YLR422WYLR422W 5799 nt1.96□□□□□ -2.09
HDA1P53973 YIL020C-AYIL020C-A 339 nt1.96□□□□□ -2.1
HDA1P53973 ADR1YDR216W 3972 nt1.96□□□□□ -2.1
HDA1P53973 CTF4YPR135W 2784 nt1.95□□□□□ -2.1
HDA1P53973 YDR354C-AYDR354C-A 144 nt1.95□□□□□ -2.1
HDA1P53973 IRC20YLR247C 4671 nt1.95□□□□□ -2.1
HDA1P53973 PDR8YLR266C 2106 nt1.95□□□□□ -2.1
HDA1P53973 COA6YMR244C-A 315 nt1.95□□□□□ -2.1
HDA1P53973 SPO24YPR036W-A 204 nt1.95□□□□□ -2.1
HDA1P53973 YOR093CYOR093C 4947 nt1.94□□□□□ -2.1
HDA1P53973 YNL205CYNL205C 423 nt1.94□□□□□ -2.1
HDA1P53973 CFT1YDR301W 4074 nt1.93□□□□□ -2.1
HDA1P53973 YBL053WYBL053W 375 nt1.93□□□□□ -2.1
HDA1P53973 YBR221W-AYBR221W-A 105 nt1.93□□□□□ -2.1
HDA1P53973 YGR109W-BYGR109W-B 4644 nt1.92□□□□□ -2.1
HDA1P53973 RTP1YMR185W 2946 nt1.92□□□□□ -2.1
HDA1P53973 YHL015W-AYHL015W-A 84 nt1.92□□□□□ -2.1
HDA1P53973 RPS30BYOR182C 192 nt1.92□□□□□ -2.1
HDA1P53973 FIG2YCR089W 4830 nt1.92□□□□□ -2.1
HDA1P53973 FAB1YFR019W 6837 nt1.91□□□□□ -2.1
HDA1P53973 snR85snR85 171 nt1.91□□□□□ -2.1
HDA1P53973 snR48snR48 113 nt1.91□□□□□ -2.1
HDA1P53973 YJL026C-AYJL026C-A 222 nt1.9□□□□□ -2.11
HDA1P53973 APL1YJR005W 2103 nt1.9□□□□□ -2.11
HDA1P53973 PAA1YDR071C 576 nt1.89□□□□□ -2.11
HDA1P53973 TMA7YLR262C-A 195 nt1.89□□□□□ -2.11
HDA1P53973 YPL044CYPL044C 549 nt1.89□□□□□ -2.11
HDA1P53973 FKS1YLR342W 5631 nt1.89□□□□□ -2.11
HDA1P53973 RAD50YNL250W 3939 nt1.89□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 33.1 ms