Protein–RNA interactions for Protein: P53947

YNL058C, Vacuolar membrane protein YNL058C, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL058CP53947 CFT1YDR301W 4074 nt1.82□□□□□ -2.12
YNL058CP53947 NOC3YLR002C 1992 nt1.82□□□□□ -2.12
YNL058CP53947 ISD11YER048W-A 285 nt1.82□□□□□ -2.12
YNL058CP53947 YLR466C-BYLR466C-B 117 nt1.82□□□□□ -2.12
YNL058CP53947 YBR131C-AYBR131C-A 90 nt1.82□□□□□ -2.12
YNL058CP53947 APL2YKL135C 2181 nt1.81□□□□□ -2.12
YNL058CP53947 YDL185C-AYDL185C-A 228 nt1.81□□□□□ -2.12
YNL058CP53947 RPS27BYHR021C 249 nt1.81□□□□□ -2.12
YNL058CP53947 YMR230W-AYMR230W-A 189 nt1.81□□□□□ -2.12
YNL058CP53947 ZIP2YGL249W 2115 nt1.81□□□□□ -2.12
YNL058CP53947 SEY1YOR165W 2331 nt1.8□□□□□ -2.12
YNL058CP53947 YGL217CYGL217C 342 nt1.8□□□□□ -2.12
YNL058CP53947 RRT15YLR162W-A 189 nt1.8□□□□□ -2.12
YNL058CP53947 RPS25BYLR333C 327 nt1.8□□□□□ -2.12
YNL058CP53947 SPO24YPR036W-A 204 nt1.8□□□□□ -2.12
YNL058CP53947 YBR182C-AYBR182C-A 195 nt1.8□□□□□ -2.12
YNL058CP53947 MAD1YGL086W 2250 nt1.8□□□□□ -2.12
YNL058CP53947 VPS15YBR097W 4365 nt1.8□□□□□ -2.12
YNL058CP53947 YGR151CYGR151C 336 nt1.79□□□□□ -2.12
YNL058CP53947 YIR030W-AYIR030W-A 384 nt1.79□□□□□ -2.12
YNL058CP53947 PIG1YLR273C 1947 nt1.79□□□□□ -2.12
YNL058CP53947 SEC5YDR166C 2916 nt1.79□□□□□ -2.12
YNL058CP53947 YOR376WYOR376W 369 nt1.78□□□□□ -2.12
YNL058CP53947 YBR174CYBR174C 315 nt1.78□□□□□ -2.12
YNL058CP53947 FRK1YPL141C 2598 nt1.78□□□□□ -2.12
YNL058CP53947 ADR1YDR216W 3972 nt1.77□□□□□ -2.13
YNL058CP53947 YMR272W-BYMR272W-B 108 nt1.77□□□□□ -2.13
YNL058CP53947 SSK2YNR031C 4740 nt1.77□□□□□ -2.13
YNL058CP53947 YGR109W-BYGR109W-B 4644 nt1.77□□□□□ -2.13
YNL058CP53947 SAS3YBL052C 2496 nt1.76□□□□□ -2.13
YNL058CP53947 SXM1YDR395W 2835 nt1.76□□□□□ -2.13
YNL058CP53947 MLH3YPL164C 2148 nt1.75□□□□□ -2.13
YNL058CP53947 YOR218CYOR218C 420 nt1.75□□□□□ -2.13
YNL058CP53947 MAK10YEL053C 2202 nt1.75□□□□□ -2.13
YNL058CP53947 YKU70YMR284W 1809 nt1.75□□□□□ -2.13
YNL058CP53947 CTF4YPR135W 2784 nt1.74□□□□□ -2.13
YNL058CP53947 OLI1Q0130 231 nt1.74□□□□□ -2.13
YNL058CP53947 YLR140WYLR140W 327 nt1.74□□□□□ -2.13
YNL058CP53947 YOR345CYOR345C 351 nt1.74□□□□□ -2.13
YNL058CP53947 MSH6YDR097C 3729 nt1.74□□□□□ -2.13
YNL058CP53947 CHS1YNL192W 3396 nt1.74□□□□□ -2.13
YNL058CP53947 VPS55YJR044C 423 nt1.73□□□□□ -2.13
YNL058CP53947 YMR175W-AYMR175W-A 195 nt1.73□□□□□ -2.13
YNL058CP53947 YNL338WYNL338W 159 nt1.73□□□□□ -2.13
YNL058CP53947 YBR206WYBR206W 324 nt1.73□□□□□ -2.13
YNL058CP53947 SKI3YPR189W 4299 nt1.73□□□□□ -2.13
YNL058CP53947 DGR2YKL121W 2559 nt1.73□□□□□ -2.13
YNL058CP53947 HMI1YOL095C 2121 nt1.73□□□□□ -2.13
YNL058CP53947 DCP2YNL118C 2913 nt1.73□□□□□ -2.13
YNL058CP53947 SBE22YHR103W 2559 nt1.72□□□□□ -2.13
YNL058CP53947 AHC1YOR023C 1701 nt1.72□□□□□ -2.13
YNL058CP53947 TRS65YGR166W 1683 nt1.72□□□□□ -2.13
YNL058CP53947 YDR521WYDR521W 336 nt1.72□□□□□ -2.13
YNL058CP53947 COF1YLL050C 432 nt1.72□□□□□ -2.13
YNL058CP53947 snR46snR46 197 nt1.71□□□□□ -2.14
YNL058CP53947 CTR9YOL145C 3234 nt1.71□□□□□ -2.14
YNL058CP53947 LAA1YJL207C 6045 nt1.71□□□□□ -2.14
YNL058CP53947 TBS1YBR150C 3285 nt1.7□□□□□ -2.14
YNL058CP53947 PIK1YNL267W 3201 nt1.7□□□□□ -2.14
YNL058CP53947 PRP39YML046W 1890 nt1.69□□□□□ -2.14
YNL058CP53947 ALK1YGL021W 2283 nt1.69□□□□□ -2.14
YNL058CP53947 YDL007C-AYDL007C-A 258 nt1.69□□□□□ -2.14
YNL058CP53947 YLL019W-AYLL019W-A 93 nt1.69□□□□□ -2.14
YNL058CP53947 PMD1YER132C 5262 nt1.69□□□□□ -2.14
YNL058CP53947 TRM732YMR259C 4263 nt1.68□□□□□ -2.14
YNL058CP53947 ECM12YHR021W-A 456 nt1.68□□□□□ -2.14
YNL058CP53947 IRE1YHR079C 3348 nt1.68□□□□□ -2.14
YNL058CP53947 CAT8YMR280C 4302 nt1.67□□□□□ -2.14
YNL058CP53947 YLL007CYLL007C 1998 nt1.67□□□□□ -2.14
YNL058CP53947 TRM3YDL112W 4311 nt1.67□□□□□ -2.14
YNL058CP53947 MCM10YIL150C 1716 nt1.67□□□□□ -2.14
YNL058CP53947 YEL014CYEL014C 306 nt1.67□□□□□ -2.14
YNL058CP53947 YOR108C-AYOR108C-A 210 nt1.67□□□□□ -2.14
YNL058CP53947 NUP157YER105C 4176 nt1.66□□□□□ -2.14
YNL058CP53947 YDL196WYDL196W 330 nt1.66□□□□□ -2.14
YNL058CP53947 COG4YPR105C 2586 nt1.66□□□□□ -2.14
YNL058CP53947 DNF3YMR162C 4971 nt1.66□□□□□ -2.14
YNL058CP53947 SFB2YNL049C 2631 nt1.65□□□□□ -2.15
YNL058CP53947 REV3YPL167C 4515 nt1.65□□□□□ -2.15
YNL058CP53947 BST1YFL025C 3090 nt1.65□□□□□ -2.15
YNL058CP53947 snR14snR14 160 nt1.65□□□□□ -2.15
YNL058CP53947 PMP1YCR024C-A 123 nt1.64□□□□□ -2.15
YNL058CP53947 YIL134C-AYIL134C-A 204 nt1.64□□□□□ -2.15
YNL058CP53947 IFH1YLR223C 3258 nt1.64□□□□□ -2.15
YNL058CP53947 CCH1YGR217W 6120 nt1.64□□□□□ -2.15
YNL058CP53947 YDR354C-AYDR354C-A 144 nt1.63□□□□□ -2.15
YNL058CP53947 MSH3YCR092C 3057 nt1.63□□□□□ -2.15
YNL058CP53947 NUP192YJL039C 5052 nt1.63□□□□□ -2.15
YNL058CP53947 SLI15YBR156C 2097 nt1.62□□□□□ -2.15
YNL058CP53947 ULI1YFR026C 510 nt1.62□□□□□ -2.15
YNL058CP53947 YIR044CYIR044C 186 nt1.62□□□□□ -2.15
YNL058CP53947 YOR072W-BYOR072W-B 162 nt1.62□□□□□ -2.15
YNL058CP53947 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
YNL058CP53947 SEC21YNL287W 2808 nt1.62□□□□□ -2.15
YNL058CP53947 KCS1YDR017C 3153 nt1.61□□□□□ -2.15
YNL058CP53947 YBL053WYBL053W 375 nt1.61□□□□□ -2.15
YNL058CP53947 PKH2YOL100W 3246 nt1.61□□□□□ -2.15
YNL058CP53947 RPL33BYOR234C 324 nt1.6□□□□□ -2.15
YNL058CP53947 snR52snR52 92 nt1.6□□□□□ -2.15
YNL058CP53947 SLD3YGL113W 2007 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 113.6 ms