Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 MMS22YLR320W 4365 nt3.74□□□□□ -1.81
YCK3P39962 SWR1YDR334W 4545 nt3.74□□□□□ -1.81
YCK3P39962 RGR1YLR071C 3249 nt3.74□□□□□ -1.81
YCK3P39962 PDR3YBL005W 2931 nt3.74□□□□□ -1.81
YCK3P39962 CAF120YNL278W 3183 nt3.73□□□□□ -1.81
YCK3P39962 VBA4YDR119W 2307 nt3.73□□□□□ -1.81
YCK3P39962 RPO41YFL036W 4056 nt3.72□□□□□ -1.81
YCK3P39962 SEC3YER008C 4011 nt3.71□□□□□ -1.82
YCK3P39962 YOR394C-AYOR394C-A 168 nt3.71□□□□□ -1.82
YCK3P39962 SPT23YKL020C 3249 nt3.7□□□□□ -1.82
YCK3P39962 MYO3YKL129C 3819 nt3.7□□□□□ -1.82
YCK3P39962 snR7-SsnR7-S 179 nt3.7□□□□□ -1.82
YCK3P39962 YKL106C-AYKL106C-A 120 nt3.7□□□□□ -1.82
YCK3P39962 PDR5YOR153W 4536 nt3.7□□□□□ -1.82
YCK3P39962 CSE1YGL238W 2883 nt3.69□□□□□ -1.82
YCK3P39962 DAN4YJR151C 3486 nt3.69□□□□□ -1.82
YCK3P39962 JSN1YJR091C 3276 nt3.69□□□□□ -1.82
YCK3P39962 YNR065CYNR065C 3351 nt3.67□□□□□ -1.82
YCK3P39962 AKR1YDR264C 2295 nt3.67□□□□□ -1.82
YCK3P39962 snR190snR190 190 nt3.67□□□□□ -1.82
YCK3P39962 YOL019W-AYOL019W-A 153 nt3.66□□□□□ -1.82
YCK3P39962 RPB2YOR151C 3675 nt3.65□□□□□ -1.82
YCK3P39962 PAN2YGL094C 3348 nt3.64□□□□□ -1.83
YCK3P39962 SMC6YLR383W 3345 nt3.64□□□□□ -1.83
YCK3P39962 TCB2YNL087W 3537 nt3.64□□□□□ -1.83
YCK3P39962 SAC3YDR159W 3906 nt3.64□□□□□ -1.83
YCK3P39962 SEN1YLR430W 6696 nt3.64□□□□□ -1.83
YCK3P39962 CBF2YGR140W 2871 nt3.64□□□□□ -1.83
YCK3P39962 YPR022CYPR022C 3402 nt3.63□□□□□ -1.83
YCK3P39962 MSB1YOR188W 3414 nt3.63□□□□□ -1.83
YCK3P39962 RAX2YLR084C 3663 nt3.63□□□□□ -1.83
YCK3P39962 YPK9YOR291W 4419 nt3.62□□□□□ -1.83
YCK3P39962 YPL060C-AYPL060C-A 3315 nt3.62□□□□□ -1.83
YCK3P39962 FAS2YPL231W 5664 nt3.61□□□□□ -1.83
YCK3P39962 YEF3YLR249W 3135 nt3.61□□□□□ -1.83
YCK3P39962 FLO10YKR102W 3510 nt3.6□□□□□ -1.83
YCK3P39962 INP51YIL002C 2841 nt3.6□□□□□ -1.83
YCK3P39962 TSC11YER093C 4293 nt3.59□□□□□ -1.83
YCK3P39962 BUD4YJR092W 4344 nt3.59□□□□□ -1.84
YCK3P39962 MET5YJR137C 4329 nt3.58□□□□□ -1.84
YCK3P39962 ARO80YDR421W 2853 nt3.58□□□□□ -1.84
YCK3P39962 YJL077W-AYJL077W-A 87 nt3.58□□□□□ -1.84
YCK3P39962 ROM2YLR371W 4071 nt3.58□□□□□ -1.84
YCK3P39962 FLO9YAL063C 3969 nt3.57□□□□□ -1.84
YCK3P39962 tQ(UUG)QtQ(UUG)Q 76 nt3.57□□□□□ -1.84
YCK3P39962 tQ(UUG)CtQ(UUG)C 72 nt3.56□□□□□ -1.84
YCK3P39962 tQ(UUG)D1tQ(UUG)D1 72 nt3.56□□□□□ -1.84
YCK3P39962 tQ(UUG)D2tQ(UUG)D2 72 nt3.56□□□□□ -1.84
YCK3P39962 tQ(UUG)D3tQ(UUG)D3 72 nt3.56□□□□□ -1.84
YCK3P39962 tQ(UUG)E1tQ(UUG)E1 72 nt3.56□□□□□ -1.84
YCK3P39962 tQ(UUG)HtQ(UUG)H 72 nt3.56□□□□□ -1.84
YCK3P39962 tQ(UUG)LtQ(UUG)L 72 nt3.56□□□□□ -1.84
YCK3P39962 HUG1YML058W-A 207 nt3.56□□□□□ -1.84
YCK3P39962 NUP133YKR082W 3474 nt3.56□□□□□ -1.84
YCK3P39962 RAD1YPL022W 3303 nt3.55□□□□□ -1.84
YCK3P39962 RDN5-1RDN5-1 121 nt3.55□□□□□ -1.84
YCK3P39962 RDN5-6RDN5-6 121 nt3.55□□□□□ -1.84
YCK3P39962 BUB1YGR188C 3066 nt3.54□□□□□ -1.84
YCK3P39962 BST1YFL025C 3090 nt3.54□□□□□ -1.84
YCK3P39962 COP1YDL145C 3606 nt3.53□□□□□ -1.84
YCK3P39962 PAU10YDR542W 363 nt3.52□□□□□ -1.85
YCK3P39962 PAU12YGR294W 363 nt3.52□□□□□ -1.85
YCK3P39962 PAU4YLR461W 363 nt3.52□□□□□ -1.85
YCK3P39962 ULS1YOR191W 4860 nt3.52□□□□□ -1.85
YCK3P39962 MSH6YDR097C 3729 nt3.52□□□□□ -1.85
YCK3P39962 TRM3YDL112W 4311 nt3.51□□□□□ -1.85
YCK3P39962 TMA17YDL110C 453 nt3.51□□□□□ -1.85
YCK3P39962 PRP16YKR086W 3216 nt3.51□□□□□ -1.85
YCK3P39962 AXL1YPR122W 3627 nt3.5□□□□□ -1.85
YCK3P39962 GAL11YOL051W 3246 nt3.5□□□□□ -1.85
YCK3P39962 tL(UAG)JtL(UAG)J 82 nt3.5□□□□□ -1.85
YCK3P39962 tL(UAG)L1tL(UAG)L1 82 nt3.5□□□□□ -1.85
YCK3P39962 tL(UAG)L2tL(UAG)L2 82 nt3.5□□□□□ -1.85
YCK3P39962 TOF1YNL273W 3717 nt3.49□□□□□ -1.85
YCK3P39962 YOR296WYOR296W 3870 nt3.48□□□□□ -1.85
YCK3P39962 FYV8YGR196C 2454 nt3.48□□□□□ -1.85
YCK3P39962 ATG2YNL242W 4779 nt3.48□□□□□ -1.85
YCK3P39962 SSM4YIL030C 3960 nt3.47□□□□□ -1.85
YCK3P39962 tC(GCA)QtC(GCA)Q 76 nt3.46□□□□□ -1.86
YCK3P39962 YGR067CYGR067C 2415 nt3.46□□□□□ -1.86
YCK3P39962 YCF1YDR135C 4548 nt3.46□□□□□ -1.86
YCK3P39962 YIL169CYIL169C 2988 nt3.44□□□□□ -1.86
YCK3P39962 RPO21YDL140C 5202 nt3.44□□□□□ -1.86
YCK3P39962 KIP1YBL063W 3336 nt3.44□□□□□ -1.86
YCK3P39962 TRK1YJL129C 3708 nt3.43□□□□□ -1.86
YCK3P39962 YBR141W-AYBR141W-A 96 nt3.43□□□□□ -1.86
YCK3P39962 ULP2YIL031W 3105 nt3.43□□□□□ -1.86
YCK3P39962 SLA1YBL007C 3735 nt3.42□□□□□ -1.86
YCK3P39962 SSD1YDR293C 3753 nt3.42□□□□□ -1.86
YCK3P39962 ENA5YDR038C 3276 nt3.41□□□□□ -1.86
YCK3P39962 ENA2YDR039C 3276 nt3.41□□□□□ -1.86
YCK3P39962 MLP2YIL149C 5040 nt3.4□□□□□ -1.87
YCK3P39962 RSE1YML049C 4086 nt3.39□□□□□ -1.87
YCK3P39962 YHR032C-AYHR032C-A 120 nt3.39□□□□□ -1.87
YCK3P39962 FAS1YKL182W 6156 nt3.39□□□□□ -1.87
YCK3P39962 SPO71YDR104C 3738 nt3.37□□□□□ -1.87
YCK3P39962 RPA135YPR010C 3612 nt3.37□□□□□ -1.87
YCK3P39962 RPO31YOR116C 4383 nt3.37□□□□□ -1.87
YCK3P39962 RAD26YJR035W 3258 nt3.36□□□□□ -1.87
YCK3P39962 UTP21YLR409C 2820 nt3.36□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms