Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 SLM1YIL105C 2061 nt2.29□□□□□ -2.04
DEF1P35732 SEC16YPL085W 6588 nt2.28□□□□□ -2.04
DEF1P35732 ATG9YDL149W 2994 nt2.28□□□□□ -2.04
DEF1P35732 AHC1YOR023C 1701 nt2.28□□□□□ -2.04
DEF1P35732 YMR247W-AYMR247W-A 144 nt2.28□□□□□ -2.04
DEF1P35732 NUP170YBL079W 4509 nt2.27□□□□□ -2.05
DEF1P35732 snR61snR61 90 nt2.27□□□□□ -2.05
DEF1P35732 YPL044CYPL044C 549 nt2.27□□□□□ -2.05
DEF1P35732 HAL9YOL089C 3093 nt2.26□□□□□ -2.05
DEF1P35732 PBY1YBR094W 2262 nt2.25□□□□□ -2.05
DEF1P35732 APL5YPL195W 2799 nt2.25□□□□□ -2.05
DEF1P35732 RPL31AYDL075W 342 nt2.25□□□□□ -2.05
DEF1P35732 PAA1YDR071C 576 nt2.25□□□□□ -2.05
DEF1P35732 YNL067W-BYNL067W-B 141 nt2.25□□□□□ -2.05
DEF1P35732 PIP2YOR363C 2991 nt2.25□□□□□ -2.05
DEF1P35732 IRC20YLR247C 4671 nt2.25□□□□□ -2.05
DEF1P35732 YMR242W-AYMR242W-A 90 nt2.24□□□□□ -2.05
DEF1P35732 CAT2YML042W 2013 nt2.24□□□□□ -2.05
DEF1P35732 SLN1YIL147C 3663 nt2.23□□□□□ -2.05
DEF1P35732 VPS8YAL002W 3825 nt2.23□□□□□ -2.05
DEF1P35732 CDC31YOR257W 486 nt2.23□□□□□ -2.05
DEF1P35732 SCD5YOR329C 2619 nt2.23□□□□□ -2.05
DEF1P35732 ZIP2YGL249W 2115 nt2.23□□□□□ -2.05
DEF1P35732 YNL144CYNL144C 2223 nt2.22□□□□□ -2.05
DEF1P35732 SIR4YDR227W 4077 nt2.22□□□□□ -2.05
DEF1P35732 NOC3YLR002C 1992 nt2.22□□□□□ -2.05
DEF1P35732 YDL118WYDL118W 381 nt2.22□□□□□ -2.05
DEF1P35732 YFR012W-AYFR012W-A 87 nt2.22□□□□□ -2.05
DEF1P35732 tL(UAA)QtL(UAA)Q 85 nt2.22□□□□□ -2.05
DEF1P35732 UBR2YLR024C 5619 nt2.22□□□□□ -2.05
DEF1P35732 RAD34YDR314C 2079 nt2.22□□□□□ -2.05
DEF1P35732 IRR1YIL026C 3453 nt2.22□□□□□ -2.05
DEF1P35732 ZRG8YER033C 3231 nt2.21□□□□□ -2.06
DEF1P35732 YLR035C-AYLR035C-A 3468 nt2.21□□□□□ -2.06
DEF1P35732 YIL134C-AYIL134C-A 204 nt2.21□□□□□ -2.06
DEF1P35732 CMC4YMR194C-B 222 nt2.21□□□□□ -2.06
DEF1P35732 ZRG17YNR039C 1818 nt2.21□□□□□ -2.06
DEF1P35732 VPS15YBR097W 4365 nt2.2□□□□□ -2.06
DEF1P35732 SMC6YLR383W 3345 nt2.2□□□□□ -2.06
DEF1P35732 SBH1YER087C-B 249 nt2.2□□□□□ -2.06
DEF1P35732 SBE22YHR103W 2559 nt2.2□□□□□ -2.06
DEF1P35732 CTF4YPR135W 2784 nt2.2□□□□□ -2.06
DEF1P35732 RTT101YJL047C 2529 nt2.19□□□□□ -2.06
DEF1P35732 YCR038W-AYCR038W-A 126 nt2.19□□□□□ -2.06
DEF1P35732 RPS30BYOR182C 192 nt2.19□□□□□ -2.06
DEF1P35732 INP53YOR109W 3324 nt2.19□□□□□ -2.06
DEF1P35732 SAS3YBL052C 2496 nt2.19□□□□□ -2.06
DEF1P35732 NAM7YMR080C 2916 nt2.19□□□□□ -2.06
DEF1P35732 CDC53YDL132W 2448 nt2.18□□□□□ -2.06
DEF1P35732 ZIP1YDR285W 2628 nt2.18□□□□□ -2.06
DEF1P35732 DGR1YNL130C-A 147 nt2.18□□□□□ -2.06
DEF1P35732 YNL211CYNL211C 261 nt2.18□□□□□ -2.06
DEF1P35732 SLD3YGL113W 2007 nt2.18□□□□□ -2.06
DEF1P35732 KOG1YHR186C 4674 nt2.18□□□□□ -2.06
DEF1P35732 MAD1YGL086W 2250 nt2.17□□□□□ -2.06
DEF1P35732 OST4YDL232W 111 nt2.17□□□□□ -2.06
DEF1P35732 YLR282CYLR282C 342 nt2.17□□□□□ -2.06
DEF1P35732 DGR2YKL121W 2559 nt2.17□□□□□ -2.06
DEF1P35732 CDC60YPL160W 3273 nt2.16□□□□□ -2.06
DEF1P35732 YCR102W-AYCR102W-A 198 nt2.16□□□□□ -2.06
DEF1P35732 YGL041C-BYGL041C-B 183 nt2.16□□□□□ -2.06
DEF1P35732 BUD2YKL092C 3315 nt2.16□□□□□ -2.06
DEF1P35732 DCP2YNL118C 2913 nt2.16□□□□□ -2.06
DEF1P35732 YOR343W-BYOR343W-B 5313 nt2.15□□□□□ -2.06
DEF1P35732 YOR108C-AYOR108C-A 210 nt2.15□□□□□ -2.07
DEF1P35732 HSH155YMR288W 2916 nt2.15□□□□□ -2.07
DEF1P35732 CHC1YGL206C 4962 nt2.15□□□□□ -2.07
DEF1P35732 FKS1YLR342W 5631 nt2.15□□□□□ -2.07
DEF1P35732 YFR016CYFR016C 3702 nt2.15□□□□□ -2.07
DEF1P35732 YDR354C-AYDR354C-A 144 nt2.14□□□□□ -2.07
DEF1P35732 YIL142C-AYIL142C-A 333 nt2.14□□□□□ -2.07
DEF1P35732 SAP190YKR028W 3102 nt2.14□□□□□ -2.07
DEF1P35732 YOR019WYOR019W 2193 nt2.13□□□□□ -2.07
DEF1P35732 PEP1YBL017C 4740 nt2.13□□□□□ -2.07
DEF1P35732 TFC3YAL001C 3483 nt2.13□□□□□ -2.07
DEF1P35732 UTP21YLR409C 2820 nt2.13□□□□□ -2.07
DEF1P35732 UFD4YKL010C 4452 nt2.12□□□□□ -2.07
DEF1P35732 MMS22YLR320W 4365 nt2.12□□□□□ -2.07
DEF1P35732 HSL1YKL101W 4557 nt2.12□□□□□ -2.07
DEF1P35732 SOM1YEL059C-A 225 nt2.12□□□□□ -2.07
DEF1P35732 PKH3YDR466W 2697 nt2.11□□□□□ -2.07
DEF1P35732 COX12YLR038C 252 nt2.11□□□□□ -2.07
DEF1P35732 PTP2YOR208W 2253 nt2.11□□□□□ -2.07
DEF1P35732 ENV11YGR071C 2583 nt2.1□□□□□ -2.07
DEF1P35732 UTP22YGR090W 3714 nt2.1□□□□□ -2.07
DEF1P35732 YBR206WYBR206W 324 nt2.1□□□□□ -2.07
DEF1P35732 PRP5YBR237W 2550 nt2.1□□□□□ -2.07
DEF1P35732 HER1YOR227W 3741 nt2.1□□□□□ -2.07
DEF1P35732 APL2YKL135C 2181 nt2.09□□□□□ -2.08
DEF1P35732 BPH1YCR032W 6504 nt2.08□□□□□ -2.08
DEF1P35732 YHR214C-BYHR214C-B 5382 nt2.07□□□□□ -2.08
DEF1P35732 YLL054CYLL054C 2532 nt2.07□□□□□ -2.08
DEF1P35732 YJL052C-AYJL052C-A 120 nt2.07□□□□□ -2.08
DEF1P35732 CHS6YJL099W 2241 nt2.07□□□□□ -2.08
DEF1P35732 ALK1YGL021W 2283 nt2.07□□□□□ -2.08
DEF1P35732 YGR109W-BYGR109W-B 4644 nt2.06□□□□□ -2.08
DEF1P35732 MAK10YEL053C 2202 nt2.06□□□□□ -2.08
DEF1P35732 YDR521WYDR521W 336 nt2.06□□□□□ -2.08
DEF1P35732 BRE1YDL074C 2103 nt2.05□□□□□ -2.08
DEF1P35732 YJL026C-AYJL026C-A 222 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 297.3 ms