Protein–RNA interactions for Protein: P0CX56

RPS18B, 40S ribosomal protein S18-B, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS18BP0CX56 tH(GUG)G2tH(GUG)G2 72 nt1.09□□□□□ -2.23
RPS18BP0CX56 tH(GUG)HtH(GUG)H 72 nt1.09□□□□□ -2.23
RPS18BP0CX56 tH(GUG)KtH(GUG)K 72 nt1.09□□□□□ -2.23
RPS18BP0CX56 tH(GUG)MtH(GUG)M 72 nt1.09□□□□□ -2.23
RPS18BP0CX56 TAR1YLR154W-C 375 nt1.09□□□□□ -2.23
RPS18BP0CX56 YPL225WYPL225W 441 nt1.09□□□□□ -2.23
RPS18BP0CX56 FIG4YNL325C 2640 nt1.08□□□□□ -2.24
RPS18BP0CX56 AIM44YPL158C 2277 nt1.08□□□□□ -2.24
RPS18BP0CX56 YPR063CYPR063C 423 nt1.08□□□□□ -2.24
RPS18BP0CX56 YBR221W-AYBR221W-A 105 nt1.08□□□□□ -2.24
RPS18BP0CX56 CDC39YCR093W 6327 nt1.08□□□□□ -2.24
RPS18BP0CX56 SET3YKR029C 2256 nt1.08□□□□□ -2.24
RPS18BP0CX56 PKH2YOL100W 3246 nt1.08□□□□□ -2.24
RPS18BP0CX56 RPL34BYIL052C 366 nt1.07□□□□□ -2.24
RPS18BP0CX56 YIR044CYIR044C 186 nt1.07□□□□□ -2.24
RPS18BP0CX56 MMS4YBR098W 2076 nt1.07□□□□□ -2.24
RPS18BP0CX56 RSM22YKL155C 1887 nt1.07□□□□□ -2.24
RPS18BP0CX56 YDL206WYDL206W 2289 nt1.06□□□□□ -2.24
RPS18BP0CX56 IFH1YLR223C 3258 nt1.06□□□□□ -2.24
RPS18BP0CX56 CUL3YGR003W 2235 nt1.06□□□□□ -2.24
RPS18BP0CX56 YDR524W-CYDR524W-C 90 nt1.06□□□□□ -2.24
RPS18BP0CX56 RRT15YLR162W-A 189 nt1.06□□□□□ -2.24
RPS18BP0CX56 OST1YJL002C 1431 nt1.06□□□□□ -2.24
RPS18BP0CX56 YDR169C-AYDR169C-A 150 nt1.05□□□□□ -2.24
RPS18BP0CX56 GPG1YGL121C 381 nt1.05□□□□□ -2.24
RPS18BP0CX56 STO1YMR125W 2586 nt1.05□□□□□ -2.24
RPS18BP0CX56 EAF1YDR359C 2949 nt1.05□□□□□ -2.24
RPS18BP0CX56 APL1YJR005W 2103 nt1.04□□□□□ -2.24
RPS18BP0CX56 STB6YKL072W 2301 nt1.04□□□□□ -2.24
RPS18BP0CX56 YLL007CYLL007C 1998 nt1.04□□□□□ -2.24
RPS18BP0CX56 YCK3YER123W 1575 nt1.04□□□□□ -2.24
RPS18BP0CX56 NUP145YGL092W 3954 nt1.04□□□□□ -2.24
RPS18BP0CX56 YDR521WYDR521W 336 nt1.03□□□□□ -2.24
RPS18BP0CX56 snR36snR36 182 nt1.03□□□□□ -2.24
RPS18BP0CX56 NHP2YDL208W 471 nt1.02□□□□□ -2.25
RPS18BP0CX56 PDE2YOR360C 1581 nt1.02□□□□□ -2.25
RPS18BP0CX56 YAR009CYAR009C 3591 nt1.02□□□□□ -2.25
RPS18BP0CX56 SSS1YDR086C 243 nt1.01□□□□□ -2.25
RPS18BP0CX56 YBR206WYBR206W 324 nt1.01□□□□□ -2.25
RPS18BP0CX56 PTP2YOR208W 2253 nt1.01□□□□□ -2.25
RPS18BP0CX56 NUP192YJL039C 5052 nt1.01□□□□□ -2.25
RPS18BP0CX56 YDR183C-AYDR183C-A 258 nt1□□□□□ -2.25
RPS18BP0CX56 YKL118WYKL118W 312 nt1□□□□□ -2.25
RPS18BP0CX56 YBR200W-AYBR200W-A 165 nt1□□□□□ -2.25
RPS18BP0CX56 DBP6YNR038W 1890 nt1□□□□□ -2.25
RPS18BP0CX56 PAN2YGL094C 3348 nt1□□□□□ -2.25
RPS18BP0CX56 SPO75YLL005C 2607 nt0.99□□□□□ -2.25
RPS18BP0CX56 HTL1YCR020W-B 237 nt0.99□□□□□ -2.25
RPS18BP0CX56 YFL032WYFL032W 321 nt0.99□□□□□ -2.25
RPS18BP0CX56 Q0142Q0142 177 nt0.99□□□□□ -2.25
RPS18BP0CX56 SEC3YER008C 4011 nt0.99□□□□□ -2.25
RPS18BP0CX56 YDR413CYDR413C 576 nt0.98□□□□□ -2.25
RPS18BP0CX56 YER097WYER097W 330 nt0.98□□□□□ -2.25
RPS18BP0CX56 YIL115W-AYIL115W-A 372 nt0.98□□□□□ -2.25
RPS18BP0CX56 YKL136WYKL136W 399 nt0.98□□□□□ -2.25
RPS18BP0CX56 MSH3YCR092C 3057 nt0.98□□□□□ -2.25
RPS18BP0CX56 WAR1YML076C 2835 nt0.97□□□□□ -2.25
RPS18BP0CX56 YDR344CYDR344C 444 nt0.97□□□□□ -2.25
RPS18BP0CX56 YFL063WYFL063W 456 nt0.97□□□□□ -2.25
RPS18BP0CX56 YJL120WYJL120W 324 nt0.97□□□□□ -2.25
RPS18BP0CX56 RPS25BYLR333C 327 nt0.97□□□□□ -2.25
RPS18BP0CX56 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
RPS18BP0CX56 LAA1YJL207C 6045 nt0.96□□□□□ -2.25
RPS18BP0CX56 BEM2YER155C 6504 nt0.96□□□□□ -2.26
RPS18BP0CX56 SCC2YDR180W 4482 nt0.96□□□□□ -2.26
RPS18BP0CX56 SAC3YDR159W 3906 nt0.96□□□□□ -2.26
RPS18BP0CX56 HMRA2YCR096C 360 nt0.96□□□□□ -2.26
RPS18BP0CX56 YBR064WYBR064W 429 nt0.96□□□□□ -2.26
RPS18BP0CX56 NUP157YER105C 4176 nt0.96□□□□□ -2.26
RPS18BP0CX56 SPO21YOL091W 1830 nt0.95□□□□□ -2.26
RPS18BP0CX56 YHL042WYHL042W 453 nt0.95□□□□□ -2.26
RPS18BP0CX56 YIL032CYIL032C 357 nt0.95□□□□□ -2.26
RPS18BP0CX56 INA22YIR024C 651 nt0.95□□□□□ -2.26
RPS18BP0CX56 snR60snR60 104 nt0.94□□□□□ -2.26
RPS18BP0CX56 YMR193C-AYMR193C-A 387 nt0.94□□□□□ -2.26
RPS18BP0CX56 GEA2YEL022W 4380 nt0.94□□□□□ -2.26
RPS18BP0CX56 SPT7YBR081C 3999 nt0.93□□□□□ -2.26
RPS18BP0CX56 ECM12YHR021W-A 456 nt0.93□□□□□ -2.26
RPS18BP0CX56 YGL149WYGL149W 306 nt0.92□□□□□ -2.26
RPS18BP0CX56 YOR011W-AYOR011W-A 207 nt0.92□□□□□ -2.26
RPS18BP0CX56 COG8YML071C 1824 nt0.92□□□□□ -2.26
RPS18BP0CX56 STE5YDR103W 2754 nt0.91□□□□□ -2.26
RPS18BP0CX56 RPL39YJL189W 156 nt0.91□□□□□ -2.26
RPS18BP0CX56 SIP4YJL089W 2490 nt0.91□□□□□ -2.26
RPS18BP0CX56 VIK1YPL253C 1944 nt0.9□□□□□ -2.27
RPS18BP0CX56 OLI1Q0130 231 nt0.9□□□□□ -2.27
RPS18BP0CX56 CLU1YMR012W 3834 nt0.9□□□□□ -2.27
RPS18BP0CX56 YMR321CYMR321C 318 nt0.9□□□□□ -2.27
RPS18BP0CX56 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
RPS18BP0CX56 SMC1YFL008W 3678 nt0.88□□□□□ -2.27
RPS18BP0CX56 YDL196WYDL196W 330 nt0.88□□□□□ -2.27
RPS18BP0CX56 ALG13YGL047W 609 nt0.88□□□□□ -2.27
RPS18BP0CX56 RPS27BYHR021C 249 nt0.87□□□□□ -2.27
RPS18BP0CX56 TTI1YKL033W 3117 nt0.86□□□□□ -2.27
RPS18BP0CX56 SGF11YPL047W 300 nt0.86□□□□□ -2.27
RPS18BP0CX56 ROM2YLR371W 4071 nt0.86□□□□□ -2.27
RPS18BP0CX56 tV(UAC)BtV(UAC)B 74 nt0.85□□□□□ -2.27
RPS18BP0CX56 tV(UAC)DtV(UAC)D 74 nt0.85□□□□□ -2.27
RPS18BP0CX56 CSE2YNR010W 450 nt0.85□□□□□ -2.27
RPS18BP0CX56 YOR218CYOR218C 420 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms