Protein–RNA interactions for Protein: O13563

RPN13, 26S proteasome regulatory subunit RPN13, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN13O13563 AIM44YPL158C 2277 nt1.91□□□□□ -2.1
RPN13O13563 YBR206WYBR206W 324 nt1.91□□□□□ -2.1
RPN13O13563 TRS130YMR218C 3309 nt1.91□□□□□ -2.1
RPN13O13563 YDR341CYDR341C 1824 nt1.91□□□□□ -2.1
RPN13O13563 DGR2YKL121W 2559 nt1.91□□□□□ -2.1
RPN13O13563 EDS1YBR033W 2760 nt1.9□□□□□ -2.1
RPN13O13563 YDR354C-AYDR354C-A 144 nt1.9□□□□□ -2.11
RPN13O13563 YER053C-AYER053C-A 114 nt1.9□□□□□ -2.11
RPN13O13563 MSH5YDL154W 2706 nt1.9□□□□□ -2.11
RPN13O13563 PIP2YOR363C 2991 nt1.89□□□□□ -2.11
RPN13O13563 SEC31YDL195W 3822 nt1.89□□□□□ -2.11
RPN13O13563 YDR521WYDR521W 336 nt1.89□□□□□ -2.11
RPN13O13563 HIR3YJR140C 4947 nt1.88□□□□□ -2.11
RPN13O13563 VPS8YAL002W 3825 nt1.88□□□□□ -2.11
RPN13O13563 PIG1YLR273C 1947 nt1.88□□□□□ -2.11
RPN13O13563 SAP190YKR028W 3102 nt1.88□□□□□ -2.11
RPN13O13563 RPS30BYOR182C 192 nt1.88□□□□□ -2.11
RPN13O13563 CDC31YOR257W 486 nt1.88□□□□□ -2.11
RPN13O13563 RGA1YOR127W 3024 nt1.88□□□□□ -2.11
RPN13O13563 UTP22YGR090W 3714 nt1.88□□□□□ -2.11
RPN13O13563 YOR102WYOR102W 351 nt1.87□□□□□ -2.11
RPN13O13563 YOR108C-AYOR108C-A 210 nt1.87□□□□□ -2.11
RPN13O13563 NUP100YKL068W 2880 nt1.87□□□□□ -2.11
RPN13O13563 BUB1YGR188C 3066 nt1.87□□□□□ -2.11
RPN13O13563 ALK1YGL021W 2283 nt1.86□□□□□ -2.11
RPN13O13563 YHL015W-AYHL015W-A 84 nt1.86□□□□□ -2.11
RPN13O13563 IFH1YLR223C 3258 nt1.86□□□□□ -2.11
RPN13O13563 TRL1YJL087C 2484 nt1.85□□□□□ -2.11
RPN13O13563 YCR038W-AYCR038W-A 126 nt1.85□□□□□ -2.11
RPN13O13563 FKS1YLR342W 5631 nt1.85□□□□□ -2.11
RPN13O13563 NEO1YIL048W 3456 nt1.85□□□□□ -2.11
RPN13O13563 DCP2YNL118C 2913 nt1.85□□□□□ -2.11
RPN13O13563 MLH3YPL164C 2148 nt1.85□□□□□ -2.11
RPN13O13563 NUP157YER105C 4176 nt1.84□□□□□ -2.11
RPN13O13563 RPL37BYDR500C 267 nt1.84□□□□□ -2.11
RPN13O13563 YJL022WYJL022W 309 nt1.84□□□□□ -2.11
RPN13O13563 YKR075W-AYKR075W-A 270 nt1.84□□□□□ -2.11
RPN13O13563 COX12YLR038C 252 nt1.84□□□□□ -2.11
RPN13O13563 YBR221W-AYBR221W-A 105 nt1.84□□□□□ -2.11
RPN13O13563 MAK10YEL053C 2202 nt1.84□□□□□ -2.11
RPN13O13563 SLD3YGL113W 2007 nt1.84□□□□□ -2.12
RPN13O13563 HMI1YOL095C 2121 nt1.84□□□□□ -2.12
RPN13O13563 YFR012W-AYFR012W-A 87 nt1.83□□□□□ -2.12
RPN13O13563 YJL026C-AYJL026C-A 222 nt1.83□□□□□ -2.12
RPN13O13563 AGC1YPR021C 2709 nt1.83□□□□□ -2.12
RPN13O13563 SYH1YPL105C 2550 nt1.83□□□□□ -2.12
RPN13O13563 tL(UAA)QtL(UAA)Q 85 nt1.82□□□□□ -2.12
RPN13O13563 YMR175W-AYMR175W-A 195 nt1.82□□□□□ -2.12
RPN13O13563 SKP2YNL311C 2292 nt1.82□□□□□ -2.12
RPN13O13563 PBY1YBR094W 2262 nt1.82□□□□□ -2.12
RPN13O13563 YPR097WYPR097W 3222 nt1.81□□□□□ -2.12
RPN13O13563 UBP1YDL122W 2430 nt1.81□□□□□ -2.12
RPN13O13563 PTP2YOR208W 2253 nt1.8□□□□□ -2.12
RPN13O13563 PAA1YDR071C 576 nt1.8□□□□□ -2.12
RPN13O13563 YOR314W-AYOR314W-A 111 nt1.8□□□□□ -2.12
RPN13O13563 SCP160YJL080C 3669 nt1.8□□□□□ -2.12
RPN13O13563 YNL144CYNL144C 2223 nt1.79□□□□□ -2.12
RPN13O13563 YDR544CYDR544C 429 nt1.79□□□□□ -2.12
RPN13O13563 COG4YPR105C 2586 nt1.78□□□□□ -2.12
RPN13O13563 TFB5YDR079C-A 219 nt1.78□□□□□ -2.12
RPN13O13563 YNL103W-AYNL103W-A 90 nt1.78□□□□□ -2.12
RPN13O13563 CTF4YPR135W 2784 nt1.78□□□□□ -2.12
RPN13O13563 CDC60YPL160W 3273 nt1.78□□□□□ -2.13
RPN13O13563 PKH2YOL100W 3246 nt1.77□□□□□ -2.13
RPN13O13563 RTP1YMR185W 2946 nt1.77□□□□□ -2.13
RPN13O13563 RTT107YHR154W 3213 nt1.77□□□□□ -2.13
RPN13O13563 SLN1YIL147C 3663 nt1.77□□□□□ -2.13
RPN13O13563 YCR087C-AYCR087C-A 462 nt1.76□□□□□ -2.13
RPN13O13563 YLL054CYLL054C 2532 nt1.76□□□□□ -2.13
RPN13O13563 IRC20YLR247C 4671 nt1.75□□□□□ -2.13
RPN13O13563 SBE22YHR103W 2559 nt1.75□□□□□ -2.13
RPN13O13563 PMP2YEL017C-A 132 nt1.74□□□□□ -2.13
RPN13O13563 YGL063C-AYGL063C-A 150 nt1.74□□□□□ -2.13
RPN13O13563 CTR9YOL145C 3234 nt1.74□□□□□ -2.13
RPN13O13563 PDR3YBL005W 2931 nt1.74□□□□□ -2.13
RPN13O13563 SLI15YBR156C 2097 nt1.73□□□□□ -2.13
RPN13O13563 INO80YGL150C 4470 nt1.72□□□□□ -2.13
RPN13O13563 YIL002W-AYIL002W-A 210 nt1.72□□□□□ -2.13
RPN13O13563 PET309YLR067C 2898 nt1.72□□□□□ -2.13
RPN13O13563 YBR099CYBR099C 384 nt1.71□□□□□ -2.14
RPN13O13563 TTI1YKL033W 3117 nt1.71□□□□□ -2.14
RPN13O13563 DNA2YHR164C 4569 nt1.71□□□□□ -2.14
RPN13O13563 MSH6YDR097C 3729 nt1.7□□□□□ -2.14
RPN13O13563 YCR095W-AYCR095W-A 159 nt1.7□□□□□ -2.14
RPN13O13563 YER172C-AYER172C-A 381 nt1.7□□□□□ -2.14
RPN13O13563 SPO24YPR036W-A 204 nt1.7□□□□□ -2.14
RPN13O13563 BUD2YKL092C 3315 nt1.7□□□□□ -2.14
RPN13O13563 PRP5YBR237W 2550 nt1.7□□□□□ -2.14
RPN13O13563 IRE1YHR079C 3348 nt1.69□□□□□ -2.14
RPN13O13563 YOR019WYOR019W 2193 nt1.69□□□□□ -2.14
RPN13O13563 RTT101YJL047C 2529 nt1.69□□□□□ -2.14
RPN13O13563 MON2YNL297C 4911 nt1.69□□□□□ -2.14
RPN13O13563 LHS1YKL073W 2646 nt1.69□□□□□ -2.14
RPN13O13563 YMR247W-AYMR247W-A 144 nt1.69□□□□□ -2.14
RPN13O13563 YHR214C-BYHR214C-B 5382 nt1.69□□□□□ -2.14
RPN13O13563 FRK1YPL141C 2598 nt1.68□□□□□ -2.14
RPN13O13563 tT(UGU)HtT(UGU)H 72 nt1.68□□□□□ -2.14
RPN13O13563 MBB1YJL199C 327 nt1.68□□□□□ -2.14
RPN13O13563 YMR326CYMR326C 309 nt1.68□□□□□ -2.14
RPN13O13563 UTP21YLR409C 2820 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms